RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CHD7Q9P2D1 2997 aa19.44■□□□□ 0.7
PHRF1-204ENST00000532550 WDR81Q562E7 1941 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 PRRC2BQ5JSZ5 2229 aaKnown RBP19.43■□□□□ 0.7
PHRF1-204ENST00000532550 EPOPA6NHQ4 379 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 ZBTB42B2RXF5 422 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 MAGEB2O15479 319 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 ERVK-21P61565 698 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 PPP4R3AQ6IN85 833 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 NSUN7Q8NE18 718 aaKnown RBP19.43■□□□□ 0.7
PHRF1-204ENST00000532550 OXER1Q8TDS5 423 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 FTHL17Q9BXU8 183 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 TSPYL2Q9H2G4 693 aaPredicted RBP19.43■□□□□ 0.7
PHRF1-204ENST00000532550 MTUS1Q9ULD2 1270 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 PADI3Q9ULW8 664 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 LIMCH1Q9UPQ0 1083 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 GINS2Q9Y248 185 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 KDM3AQ9Y4C1 1321 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 UNC80Q8N2C7 3258 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 LOXHD1Q8IVV2 1947 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 PRUNE2Q8WUY3 3088 aa19.43■□□□□ 0.7
PHRF1-204ENST00000532550 MARCH6O60337 910 aa19.42■□□□□ 0.7
PHRF1-204ENST00000532550 CCNT1O60563 726 aaKnown RBP19.42■□□□□ 0.7
PHRF1-204ENST00000532550 C22orf31O95567 290 aa19.42■□□□□ 0.7
PHRF1-204ENST00000532550 OATP04181 439 aa19.42■□□□□ 0.7
PHRF1-204ENST00000532550 GCFC2P16383 781 aaKnown RBP19.42■□□□□ 0.7
PHRF1-204ENST00000532550 KRT2P35908 639 aa19.42■□□□□ 0.7
PHRF1-204ENST00000532550 PAK2Q13177 524 aa19.42■□□□□ 0.7
PHRF1-204ENST00000532550 GRB10Q13322 594 aa19.42■□□□□ 0.7
PHRF1-204ENST00000532550 TRIM29Q14134 588 aa19.42■□□□□ 0.7
PHRF1-204ENST00000532550 SPRED2Q7Z698 418 aa19.42■□□□□ 0.7
PHRF1-204ENST00000532550 ETNPPLQ8TBG4 499 aa19.42■□□□□ 0.7
PHRF1-204ENST00000532550 MTCH2Q9Y6C9 303 aa19.42■□□□□ 0.7
PHRF1-204ENST00000532550 IGSF9BQ9UPX0 1349 aa19.42■□□□□ 0.7
PHRF1-204ENST00000532550 ZNF862O60290 1169 aa19.41■□□□□ 0.7
PHRF1-204ENST00000532550 TMOD1P28289 359 aa19.41■□□□□ 0.7
PHRF1-204ENST00000532550 PRKCEQ02156 737 aa19.41■□□□□ 0.7
PHRF1-204ENST00000532550 C8orf34Q49A92 452 aa19.41■□□□□ 0.7
PHRF1-204ENST00000532550 ODR4Q5SWX8 454 aa19.41■□□□□ 0.7
PHRF1-204ENST00000532550 EFCAB12Q6NXP0 572 aa19.41■□□□□ 0.7
PHRF1-204ENST00000532550 SP7Q8TDD2 431 aaPredicted RBP19.41■□□□□ 0.7
PHRF1-204ENST00000532550 FAM20AQ96MK3 541 aa19.41■□□□□ 0.7
PHRF1-204ENST00000532550 SIP14410 1827 aa19.41■□□□□ 0.7
PHRF1-204ENST00000532550 SLC37A4O43826 429 aa19.4■□□□□ 0.7
PHRF1-204ENST00000532550 JAK2O60674 1132 aa19.4■□□□□ 0.7
PHRF1-204ENST00000532550 RPS6KA5O75582 802 aa19.4■□□□□ 0.7
PHRF1-204ENST00000532550 NFX1Q12986 1120 aaKnown RBP19.4■□□□□ 0.7
PHRF1-204ENST00000532550 B3GNT9Q6UX72 402 aa19.4■□□□□ 0.7
PHRF1-204ENST00000532550 FAM43BQ6ZT52 329 aaPredicted RBP19.4■□□□□ 0.7
PHRF1-204ENST00000532550 SAMD11Q96NU1 681 aa19.4■□□□□ 0.7
PHRF1-204ENST00000532550 SUGCTQ9HAC7 445 aa19.4■□□□□ 0.7
PHRF1-204ENST00000532550 CDHR5Q9HBB8 845 aa19.4■□□□□ 0.7
PHRF1-204ENST00000532550 PRDM6Q9NQX0 595 aa19.4■□□□□ 0.7
PHRF1-204ENST00000532550 LMCD1Q9NZU5 365 aa19.4■□□□□ 0.7
PHRF1-204ENST00000532550 TTC3P53804 2025 aa19.39■□□□□ 0.69
PHRF1-204ENST00000532550 BAG4O95429 457 aaKnown RBP19.39■□□□□ 0.69
PHRF1-204ENST00000532550 CRYBB1P53674 252 aaPredicted RBP19.39■□□□□ 0.69
PHRF1-204ENST00000532550 NR5A1Q13285 461 aa19.39■□□□□ 0.69
PHRF1-204ENST00000532550 SKIV2LQ15477 1246 aaKnown RBP19.39■□□□□ 0.69
PHRF1-204ENST00000532550 UGCGQ16739 394 aa19.39■□□□□ 0.69
PHRF1-204ENST00000532550 XKR3Q5GH77 459 aa19.39■□□□□ 0.69
PHRF1-204ENST00000532550 RTN4RL1Q86UN2 441 aaPredicted RBP19.39■□□□□ 0.69
PHRF1-204ENST00000532550 FBXO22Q8NEZ5 403 aa19.39■□□□□ 0.69
PHRF1-204ENST00000532550 ZSCAN31Q96LW9 406 aaPredicted RBP19.39■□□□□ 0.69
PHRF1-204ENST00000532550 MAP7D2Q96T17 732 aa19.39■□□□□ 0.69
PHRF1-204ENST00000532550 C17orf80Q9BSJ5 609 aa19.39■□□□□ 0.69
PHRF1-204ENST00000532550 KCNMB3Q9NPA1 279 aa19.39■□□□□ 0.69
PHRF1-204ENST00000532550 AKT3Q9Y243 479 aa19.39■□□□□ 0.69
PHRF1-204ENST00000532550 TBX3O15119 743 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 GPR182O15218 404 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 LPXNO60711 386 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 MMP1P03956 469 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 VTNP04004 478 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 FOSBP53539 338 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 TBC1D8BQ0IIM8 1120 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 KIZQ2M2Z5 673 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 TMEM266Q2M3C6 531 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 EARS2Q5JPH6 523 aaKnown RBP19.38■□□□□ 0.69
PHRF1-204ENST00000532550 KRT40Q6A162 431 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 ZNF710Q8N1W2 664 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 FIBCD1Q8N539 461 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 GDPD5Q8WTR4 605 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 PPP1R16BQ96T49 567 aa19.38■□□□□ 0.69
PHRF1-204ENST00000532550 NOC2LQ9Y3T9 749 aaKnown RBP19.38■□□□□ 0.69
PHRF1-204ENST00000532550 DDX11L8A8MPP1 907 aa19.37■□□□□ 0.69
PHRF1-204ENST00000532550 BTBD18B2RXH4 712 aa19.37■□□□□ 0.69
PHRF1-204ENST00000532550 STAG3L1P0CL83 205 aa19.37■□□□□ 0.69
PHRF1-204ENST00000532550 CLCN3P51790 818 aa19.37■□□□□ 0.69
PHRF1-204ENST00000532550 PSMC5P62195 406 aa19.37■□□□□ 0.69
PHRF1-204ENST00000532550 PPP2R5CQ13362 524 aa19.37■□□□□ 0.69
PHRF1-204ENST00000532550 CCDC83Q8IWF9 413 aa19.37■□□□□ 0.69
PHRF1-204ENST00000532550 DIS3L2Q8IYB7 885 aaKnown RBP19.37■□□□□ 0.69
PHRF1-204ENST00000532550 LRRC71Q8N4P6 559 aa19.37■□□□□ 0.69
PHRF1-204ENST00000532550 BANK1Q8NDB2 785 aa19.37■□□□□ 0.69
PHRF1-204ENST00000532550 ATXN2LQ8WWM7 1075 aaKnown RBP19.37■□□□□ 0.69
PHRF1-204ENST00000532550 OSMRQ99650 979 aa19.37■□□□□ 0.69
PHRF1-204ENST00000532550 LLPHQ9BRT6 129 aaKnown RBP19.37■□□□□ 0.69
PHRF1-204ENST00000532550 NIFKQ9BYG3 293 aaKnown RBP19.37■□□□□ 0.69
PHRF1-204ENST00000532550 THEGQ9P2T0 379 aa19.37■□□□□ 0.69
PHRF1-204ENST00000532550 SEPT9Q9UHD8 586 aaPredicted RBP19.37■□□□□ 0.69
PHRF1-204ENST00000532550 ST3GAL5Q9UNP4 418 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms