RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 ANKEF1Q9NU02 776 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 LMCD1Q9NZU5 365 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 FEZ2Q9UHY8 353 aaPredicted RBP12.65□□□□□ -0.38
CSRP1-215ENST00000532313 PCDHB12Q9Y5F1 795 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 CAPN15O75808 1086 aa12.65□□□□□ -0.39
CSRP1-215ENST00000532313 THPOP40225 353 aa12.65□□□□□ -0.39
CSRP1-215ENST00000532313 MAP2K5Q13163 448 aa12.65□□□□□ -0.39
CSRP1-215ENST00000532313 SNX17Q15036 470 aa12.65□□□□□ -0.39
CSRP1-215ENST00000532313 NFE2L3Q9Y4A8 694 aa12.65□□□□□ -0.39
CSRP1-215ENST00000532313 A6NJR5 290 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 SART1O43290 800 aaKnown RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 EVI5O60447 810 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 CTSHP09668 335 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 LRRC63Q05C16 580 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 RIOX2Q8IUF8 465 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 OR6B3Q8NGW1 331 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 ACER1Q8TDN7 264 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 ODF2LQ9ULJ1 636 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 MTMR6Q9Y217 621 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 ADCY5O95622 1261 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 BRD1O95696 1058 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 ADORA2AP29274 412 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 RAB27AP51159 221 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 CASP7P55210 303 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 ELAVL2Q12926 359 aaKnown RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 FAM110CQ1W6H9 321 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 NOTUMQ6P988 496 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 HAUS6Q7Z4H7 955 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 SH3TC2Q8TF17 1288 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 CCDC51Q96ER9 411 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 CENPHQ9H3R5 247 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 NMRK2Q9NPI5 230 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 FARP1Q9Y4F1 1045 aaPredicted RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 PARNO95453 639 aaKnown RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 AFPP02771 609 aaKnown RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 PRKCBP05771 671 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 XRCC6P12956 609 aaKnown RBP eCLIP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 YWHABP31946 246 aaKnown RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 RECQLP46063 649 aaPredicted RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 SARNPP82979 210 aaKnown RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 NR5A1Q13285 461 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 DCAF4L1Q3SXM0 396 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 DCP1BQ8IZD4 617 aaKnown RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 FAM149B1Q96BN6 582 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 P2RX7Q99572 595 aaKnown RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 IQCGQ9H095 443 aaKnown RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 PVALEFA0A1B0GWK0 134 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 H7C4K7 107 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 URI1O94763 535 aaPredicted RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 STAMBPO95630 424 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 MUTP22033 750 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 OSTNP61366 133 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 ARHGAP15Q53QZ3 475 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 RNF149Q8NC42 400 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 APPL2Q8NEU8 664 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 TNIP3Q96KP6 325 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 LSM14BQ9BX40 385 aaKnown RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 JMJD4Q9H9V9 463 aa12.64□□□□□ -0.39
CSRP1-215ENST00000532313 SCAF8Q9UPN6 1271 aaKnown RBP12.64□□□□□ -0.39
CSRP1-215ENST00000532313 LOC102724159A0A0B4J2E5 919 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 SLU7O95391 586 aaKnown RBP12.63□□□□□ -0.39
CSRP1-215ENST00000532313 EYA4O95677 639 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 MORC3Q14149 939 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 PWP2Q15269 919 aaKnown RBP12.63□□□□□ -0.39
CSRP1-215ENST00000532313 MOXD1Q6UVY6 613 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 ZNF579Q8NAF0 562 aaKnown RBP12.63□□□□□ -0.39
CSRP1-215ENST00000532313 XXYLT1Q8NBI6 393 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 CSPG5O95196 566 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 PLCG1P19174 1290 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 CALCOCO2Q13137 446 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 SPRYD7Q5W111 196 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 EIF2AK1Q9BQI3 630 aaKnown RBP12.63□□□□□ -0.39
CSRP1-215ENST00000532313 KANSL3Q9P2N6 904 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 NXF1Q9UBU9 619 aaKnown RBP12.63□□□□□ -0.39
CSRP1-215ENST00000532313 SFSWAPQ12872 951 aaKnown RBP12.63□□□□□ -0.39
CSRP1-215ENST00000532313 LRMPQ12912 555 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 STAMQ92783 540 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 MTRF1LQ9UGC7 380 aaKnown RBP12.63□□□□□ -0.39
CSRP1-215ENST00000532313 UPP2O95045 317 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 CAPN2P17655 700 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 GRK4P32298 578 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 TMTC1Q8IUR5 882 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 EFCAB13Q8IY85 973 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 GPR161Q8N6U8 529 aaKnown RBP12.63□□□□□ -0.39
CSRP1-215ENST00000532313 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.63□□□□□ -0.39
CSRP1-215ENST00000532313 MRPL9Q9BYD2 267 aaKnown RBP12.63□□□□□ -0.39
CSRP1-215ENST00000532313 IFNKQ9P0W0 207 aa12.63□□□□□ -0.39
CSRP1-215ENST00000532313 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
CSRP1-215ENST00000532313 VWA5AO00534 786 aa12.62□□□□□ -0.39
CSRP1-215ENST00000532313 EEF1GP26641 437 aaKnown RBP12.62□□□□□ -0.39
CSRP1-215ENST00000532313 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
CSRP1-215ENST00000532313 ZNF280AP59817 542 aaPredicted RBP12.62□□□□□ -0.39
CSRP1-215ENST00000532313 MCM6Q14566 821 aa12.62□□□□□ -0.39
CSRP1-215ENST00000532313 MSL3Q8N5Y2 521 aaKnown RBP12.62□□□□□ -0.39
CSRP1-215ENST00000532313 C17orf75Q9HAS0 396 aa12.62□□□□□ -0.39
CSRP1-215ENST00000532313 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
CSRP1-215ENST00000532313 TSKSQ9UJT2 592 aa12.62□□□□□ -0.39
CSRP1-215ENST00000532313 RALAP11233 206 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms