RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 MTFR1LQ9H019 292 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 MAGEC2Q9UBF1 373 aaPredicted RBP8.82□□□□□ -1
CSDE1-214ENST00000530886 SEC63Q9UGP8 760 aaKnown RBP8.82□□□□□ -1
CSDE1-214ENST00000530886 PNMA3Q9UL41 463 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 SHANK3Q9BYB0 1731 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 RIC1Q4ADV7 1423 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 RPN1P04843 607 aaKnown RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 CPA3P15088 417 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 CYP11B2P19099 503 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 EIF4A3P38919 411 aaKnown RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 TTI2Q6NXR4 508 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 NCCRP1Q6ZVX7 275 aaPredicted RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 LONP2Q86WA8 852 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 DHTKD1Q96HY7 919 aaPredicted RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 PSMB7Q99436 277 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 CENPKQ9BS16 269 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 TMED5Q9Y3A6 229 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 ABCB11O95342 1321 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 CYP1A1P04798 512 aaPredicted RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 PLEKP08567 350 aaPredicted RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 PABPC4LP0CB38 370 aaKnown RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 HAND2P61296 217 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 RC3H1Q5TC82 1133 aaKnown RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 KLC3Q6P597 504 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 SYN2Q92777 582 aaPredicted RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 CATSPER2Q96P56 530 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 PUS3Q9BZE2 481 aaKnown RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 PABPC3Q9H361 631 aaKnown RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 STK32BQ9NY57 414 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 STK24Q9Y6E0 443 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 EIF4E1BA6NMX2 242 aaKnown RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 RAD21O60216 631 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 HNRNPCL1O60812 293 aaKnown RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 PFDN1O60925 122 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 ATP9AO75110 1047 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 ZFYP08048 801 aaPredicted RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 ITGA2BP08514 1039 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 LIFRP42702 1097 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 RCAN1P53805 252 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 ZC3H6P61129 1189 aaKnown RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 GPSM2P81274 684 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 FUT2Q10981 343 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 NR5A1Q13285 461 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 SCARF1Q14162 830 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 RCN2Q14257 317 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 TMEM259Q4ZIN3 620 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 LIN52Q52LA3 116 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 RASGEF1CQ8N431 466 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 IP6K1Q92551 441 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 HIC2Q96JB3 615 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 ETNK1Q9HBU6 452 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 PICK1Q9NRD5 415 aa8.81□□□□□ -1
CSDE1-214ENST00000530886 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.81□□□□□ -1
CSDE1-214ENST00000530886 FAM205CA6NFA0 338 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 ZBTB43O43298 467 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 KLRC4O43908 158 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 SMARCA1P28370 1054 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 KLK7P49862 253 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 CDK7P50613 346 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 OXCT1P55809 520 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 TIMM10P62072 90 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 PLOD1Q02809 727 aaPredicted RBP8.8□□□□□ -1
CSDE1-214ENST00000530886 DHX9Q08211 1270 aaKnown RBP8.8□□□□□ -1
CSDE1-214ENST00000530886 ADRM1Q16186 407 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 COBLL1Q53SF7 1204 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 PLPPR3Q6T4P5 718 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 TAOK1Q7L7X3 1001 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 NELFCDQ8IXH7 590 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 LRRC15Q8TF66 581 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 NAP1L3Q99457 506 aaPredicted RBP8.8□□□□□ -1
CSDE1-214ENST00000530886 NDUFA13Q9P0J0 144 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 TRIM33Q9UPN9 1127 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 ZNF148Q9UQR1 794 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 SIK3Q9Y2K2 1263 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 DUOX1Q9NRD9 1551 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 TRIM75PA6NK02 468 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 CETN3O15182 167 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 PALMO75781 387 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 RXRAP19793 462 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 PPP1R2P41236 205 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 HPCAP84074 193 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 POU5F1Q01860 360 aaKnown RBP8.8□□□□□ -1
CSDE1-214ENST00000530886 AP1B1Q10567 949 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 MAP7Q14244 749 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 TYW1BQ6NUM6 668 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 PI16Q6UXB8 463 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 CCNJLQ8IV13 435 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 UBAC1Q9BSL1 405 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 MTA3Q9BTC8 594 aa8.8□□□□□ -1
CSDE1-214ENST00000530886 TSPYL2Q9H2G4 693 aaPredicted RBP8.8□□□□□ -1
CSDE1-214ENST00000530886 METTL14Q9HCE5 456 aaKnown RBP8.8□□□□□ -1
CSDE1-214ENST00000530886 UTP6Q9NYH9 597 aaKnown RBP8.8□□□□□ -1
CSDE1-214ENST00000530886 A0A0J9YVX5 310 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 TCRBV5S4A2TA0A5A2 114 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 RASSF7Q02833 373 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 ITGA9Q13797 1035 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 GIT2Q14161 759 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 PKN1Q16512 942 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 CLPPQ16740 277 aaPredicted RBP8.79□□□□□ -1
CSDE1-214ENST00000530886 AKNAD1Q5T1N1 836 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms