RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 LRRC9Q6ZRR7 1453 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 PPP1R12AO14974 1030 aaPredicted RBP10.03□□□□□ -0.8
CSDE1-213ENST00000530784 APPP05067 770 aa10.03□□□□□ -0.8
CSDE1-213ENST00000530784 KCNA6P17658 529 aa10.03□□□□□ -0.8
CSDE1-213ENST00000530784 LACTBP83111 547 aaPredicted RBP10.03□□□□□ -0.8
CSDE1-213ENST00000530784 ABHD17CQ6PCB6 329 aa10.03□□□□□ -0.8
CSDE1-213ENST00000530784 RNPC3Q96LT9 517 aaKnown RBP10.03□□□□□ -0.8
CSDE1-213ENST00000530784 RIC8BQ9NVN3 520 aa10.03□□□□□ -0.8
CSDE1-213ENST00000530784 TMEM260Q9NX78 707 aa10.03□□□□□ -0.8
CSDE1-213ENST00000530784 ATP23Q9Y6H3 246 aa10.03□□□□□ -0.8
CSDE1-213ENST00000530784 ESYT3A0FGR9 886 aa10.02□□□□□ -0.81
CSDE1-213ENST00000530784 NOBOXO60393 691 aa10.02□□□□□ -0.81
CSDE1-213ENST00000530784 TSPY4P0CV99 314 aa10.02□□□□□ -0.81
CSDE1-213ENST00000530784 TSPY10P0CW01 314 aa10.02□□□□□ -0.81
CSDE1-213ENST00000530784 PTPN1P18031 435 aaKnown RBP10.02□□□□□ -0.81
CSDE1-213ENST00000530784 MLLT6P55198 1093 aaPredicted RBP10.02□□□□□ -0.81
CSDE1-213ENST00000530784 CTSWP56202 376 aa10.02□□□□□ -0.81
CSDE1-213ENST00000530784 PRAMEF18Q5VWM3 479 aa10.02□□□□□ -0.81
CSDE1-213ENST00000530784 CD276Q5ZPR3 534 aa10.02□□□□□ -0.81
CSDE1-213ENST00000530784 MCTP2Q6DN12 878 aa10.02□□□□□ -0.81
CSDE1-213ENST00000530784 LILRA6Q6PI73 481 aa10.02□□□□□ -0.81
CSDE1-213ENST00000530784 EP400NLQ6ZTU2 488 aa10.02□□□□□ -0.81
CSDE1-213ENST00000530784 DTX3Q8N9I9 347 aa10.02□□□□□ -0.81
CSDE1-213ENST00000530784 ADAM7Q9H2U9 754 aa10.02□□□□□ -0.81
CSDE1-213ENST00000530784 ZNF28P17035 718 aa10.01□□□□□ -0.81
CSDE1-213ENST00000530784 IL13P35225 146 aa10.01□□□□□ -0.81
CSDE1-213ENST00000530784 PFKPQ01813 784 aa10.01□□□□□ -0.81
CSDE1-213ENST00000530784 FIGNQ5HY92 759 aa10.01□□□□□ -0.81
CSDE1-213ENST00000530784 CELF4Q9BZC1 486 aaKnown RBP10.01□□□□□ -0.81
CSDE1-213ENST00000530784 DLL4Q9NR61 685 aa10.01□□□□□ -0.81
CSDE1-213ENST00000530784 USP40Q9NVE5 1235 aa10.01□□□□□ -0.81
CSDE1-213ENST00000530784 NLRP1Q9C000 1473 aa10.01□□□□□ -0.81
CSDE1-213ENST00000530784 NEURL4Q96JN8 1562 aa10.01□□□□□ -0.81
CSDE1-213ENST00000530784 MAST1Q9Y2H9 1570 aa10.01□□□□□ -0.81
CSDE1-213ENST00000530784 POLR1AO95602 1720 aaPredicted RBP10□□□□□ -0.81
CSDE1-213ENST00000530784 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10□□□□□ -0.81
CSDE1-213ENST00000530784 ASMTLO95671 621 aa10□□□□□ -0.81
CSDE1-213ENST00000530784 ENO2P09104 434 aaPredicted RBP10□□□□□ -0.81
CSDE1-213ENST00000530784 GJA9P57773 515 aa10□□□□□ -0.81
CSDE1-213ENST00000530784 SKIDA1Q1XH10 827 aa10□□□□□ -0.81
CSDE1-213ENST00000530784 RGL3Q3MIN7 710 aa10□□□□□ -0.81
CSDE1-213ENST00000530784 FNDC3BQ53EP0 1204 aaKnown RBP10□□□□□ -0.81
CSDE1-213ENST00000530784 TXNDC5Q8NBS9 432 aaKnown RBP10□□□□□ -0.81
CSDE1-213ENST00000530784 RNF17Q9BXT8 1623 aaKnown RBP10□□□□□ -0.81
CSDE1-213ENST00000530784 ZC3H13Q5T200 1668 aaKnown RBP9.99□□□□□ -0.81
CSDE1-213ENST00000530784 MIA2Q96PC5 1412 aa9.99□□□□□ -0.81
CSDE1-213ENST00000530784 CPS1P31327 1500 aa9.99□□□□□ -0.81
CSDE1-213ENST00000530784 MAP3K1Q13233 1512 aa9.99□□□□□ -0.81
CSDE1-213ENST00000530784 OVCH1Q7RTY7 1134 aa9.99□□□□□ -0.81
CSDE1-213ENST00000530784 FRMD5Q7Z6J6 570 aa9.99□□□□□ -0.81
CSDE1-213ENST00000530784 IGSF22Q8N9C0 903 aa9.99□□□□□ -0.81
CSDE1-213ENST00000530784 ZCCHC14Q8WYQ9 949 aaKnown RBP9.99□□□□□ -0.81
CSDE1-213ENST00000530784 WRNIP1Q96S55 665 aa9.99□□□□□ -0.81
CSDE1-213ENST00000530784 RTEL1Q9NZ71 1219 aa9.99□□□□□ -0.81
CSDE1-213ENST00000530784 UGGT1Q9NYU2 1555 aa9.99□□□□□ -0.81
CSDE1-213ENST00000530784 EIF2AK4Q9P2K8 1649 aaKnown RBP9.99□□□□□ -0.81
CSDE1-213ENST00000530784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.99□□□□□ -0.81
CSDE1-213ENST00000530784 ABCC3O15438 1527 aa9.98□□□□□ -0.81
CSDE1-213ENST00000530784 ZNF839A8K0R7 811 aa9.98□□□□□ -0.81
CSDE1-213ENST00000530784 CYP7B1O75881 506 aa9.98□□□□□ -0.81
CSDE1-213ENST00000530784 GLRBP48167 497 aa9.98□□□□□ -0.81
CSDE1-213ENST00000530784 DBPQ10586 325 aaPredicted RBP9.98□□□□□ -0.81
CSDE1-213ENST00000530784 SEC23AQ15436 765 aa9.98□□□□□ -0.81
CSDE1-213ENST00000530784 FAM26FQ5R3K3 315 aa9.98□□□□□ -0.81
CSDE1-213ENST00000530784 HHIPL2Q6UWX4 724 aa9.98□□□□□ -0.81
CSDE1-213ENST00000530784 DDX1Q92499 740 aaKnown RBP9.98□□□□□ -0.81
CSDE1-213ENST00000530784 L2HGDHQ9H9P8 463 aa9.98□□□□□ -0.81
CSDE1-213ENST00000530784 SLC39A2Q9NP94 309 aa9.98□□□□□ -0.81
CSDE1-213ENST00000530784 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
CSDE1-213ENST00000530784 MYOM3Q5VTT5 1437 aa9.98□□□□□ -0.81
CSDE1-213ENST00000530784 CLASP2O75122 1294 aaKnown RBP9.97□□□□□ -0.81
CSDE1-213ENST00000530784 DNAJC8O75937 253 aaPredicted RBP9.97□□□□□ -0.81
CSDE1-213ENST00000530784 GJA4P35212 333 aa9.97□□□□□ -0.81
CSDE1-213ENST00000530784 NFIXQ14938 502 aa9.97□□□□□ -0.81
CSDE1-213ENST00000530784 CPZQ66K79 652 aa9.97□□□□□ -0.81
CSDE1-213ENST00000530784 FSTL4Q6MZW2 842 aa9.97□□□□□ -0.81
CSDE1-213ENST00000530784 TRMT10BQ6PF06 316 aaKnown RBP9.97□□□□□ -0.81
CSDE1-213ENST00000530784 THEMISQ8N1K5 641 aaPredicted RBP9.97□□□□□ -0.81
CSDE1-213ENST00000530784 ARHGAP20Q9P2F6 1191 aa9.97□□□□□ -0.81
CSDE1-213ENST00000530784 ZFP69BQ9UJL9 534 aa9.97□□□□□ -0.81
CSDE1-213ENST00000530784 SHANK2Q9UPX8 1470 aa9.97□□□□□ -0.81
CSDE1-213ENST00000530784 C4BPAP04003 597 aaKnown RBP9.96□□□□□ -0.82
CSDE1-213ENST00000530784 COL6A1P12109 1028 aa9.96□□□□□ -0.82
CSDE1-213ENST00000530784 TMEM177Q53S58 311 aa9.96□□□□□ -0.82
CSDE1-213ENST00000530784 NOSTRINQ8IVI9 506 aa9.96□□□□□ -0.82
CSDE1-213ENST00000530784 TEPSINQ96N21 525 aa9.96□□□□□ -0.82
CSDE1-213ENST00000530784 TNPO3Q9Y5L0 923 aaKnown RBP9.96□□□□□ -0.82
CSDE1-213ENST00000530784 DUSP10Q9Y6W6 482 aa9.96□□□□□ -0.82
CSDE1-213ENST00000530784 NPHP4O75161 1426 aaPredicted RBP9.96□□□□□ -0.82
CSDE1-213ENST00000530784 ERVK-7P63135 1459 aa9.96□□□□□ -0.82
CSDE1-213ENST00000530784 DEPDC5O75140 1603 aa9.96□□□□□ -0.82
CSDE1-213ENST00000530784 LOC105371045A0A1W2PR82 267 aa9.95□□□□□ -0.82
CSDE1-213ENST00000530784 KRTAP9-7A8MTY7 169 aa9.95□□□□□ -0.82
CSDE1-213ENST00000530784 SCDO00767 359 aa9.95□□□□□ -0.82
CSDE1-213ENST00000530784 PRICKLE3O43900 615 aaPredicted RBP9.95□□□□□ -0.82
CSDE1-213ENST00000530784 NPTXRO95502 500 aa9.95□□□□□ -0.82
CSDE1-213ENST00000530784 SDSP20132 328 aa9.95□□□□□ -0.82
CSDE1-213ENST00000530784 FERMT3Q86UX7 667 aa9.95□□□□□ -0.82
CSDE1-213ENST00000530784 STPG3Q8N7X2 389 aa9.95□□□□□ -0.82
CSDE1-213ENST00000530784 IGDCC4Q8TDY8 1250 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms