RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 C22orf31O95567 290 aa23.85■■□□□ 1.41
CAPN1-220ENST00000530567 NCLP19338 710 aaKnown RBP23.85■■□□□ 1.41
CAPN1-220ENST00000530567 MUTP22033 750 aa23.85■■□□□ 1.41
CAPN1-220ENST00000530567 TRIM71Q2Q1W2 868 aaKnown RBP23.85■■□□□ 1.41
CAPN1-220ENST00000530567 SPECC1Q5M775 1068 aa23.85■■□□□ 1.41
CAPN1-220ENST00000530567 HYIQ5T013 277 aa23.85■■□□□ 1.41
CAPN1-220ENST00000530567 AXDND1Q5T1B0 1012 aaPredicted RBP23.85■■□□□ 1.41
CAPN1-220ENST00000530567 RUFY4Q6ZNE9 571 aa23.85■■□□□ 1.41
CAPN1-220ENST00000530567 ZNF579Q8NAF0 562 aaKnown RBP23.85■■□□□ 1.41
CAPN1-220ENST00000530567 TRIM43Q96BQ3 446 aaPredicted RBP23.85■■□□□ 1.41
CAPN1-220ENST00000530567 PNMA5Q96PV4 448 aa23.85■■□□□ 1.41
CAPN1-220ENST00000530567 KIAA0355O15063 1070 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 NPEPPSP55786 919 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 PTK7Q13308 1070 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 GRB10Q13322 594 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 MTERF2Q49AM1 385 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 MTHFD1LQ6UB35 978 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 PIGOQ8TEQ8 1089 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 TMEM39AQ9NV64 488 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 NOD1Q9Y239 953 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 PDE4DIPQ5VU43 2346 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 KLRC1P26715 233 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 CABP7Q86V35 215 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 SYMPKQ92797 1274 aaKnown RBP23.84■■□□□ 1.41
CAPN1-220ENST00000530567 EPSTI1Q96J88 318 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 NOC4LQ9BVI4 516 aaKnown RBP23.84■■□□□ 1.41
CAPN1-220ENST00000530567 CCSER1Q9C0I3 900 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 PRDM5Q9NQX1 630 aaPredicted RBP23.84■■□□□ 1.41
CAPN1-220ENST00000530567 CYP26B1Q9NR63 512 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 ANKEF1Q9NU02 776 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 KIAA1024Q9UPX6 916 aa23.84■■□□□ 1.41
CAPN1-220ENST00000530567 LTBP2Q14767 1821 aa23.83■■□□□ 1.41
CAPN1-220ENST00000530567 ITGB8P26012 769 aa23.83■■□□□ 1.4
CAPN1-220ENST00000530567 MLLT1Q03111 559 aaPredicted RBP23.83■■□□□ 1.4
CAPN1-220ENST00000530567 RBL2Q08999 1139 aa23.83■■□□□ 1.4
CAPN1-220ENST00000530567 TMEM119Q4V9L6 283 aa23.83■■□□□ 1.4
CAPN1-220ENST00000530567 KCNK18Q7Z418 384 aa23.83■■□□□ 1.4
CAPN1-220ENST00000530567 LINC01465Q8N7H1 131 aa23.83■■□□□ 1.4
CAPN1-220ENST00000530567 LRRC15Q8TF66 581 aa23.83■■□□□ 1.4
CAPN1-220ENST00000530567 SPATA32Q96LK8 384 aa23.83■■□□□ 1.4
CAPN1-220ENST00000530567 DDX19AQ9NUU7 478 aaKnown RBP23.83■■□□□ 1.4
CAPN1-220ENST00000530567 PCDHA7Q9UN72 937 aa23.83■■□□□ 1.4
CAPN1-220ENST00000530567 PCDHA2Q9Y5H9 948 aa23.83■■□□□ 1.4
CAPN1-220ENST00000530567 UMODL1Q5DID0 1318 aa23.82■■□□□ 1.4
CAPN1-220ENST00000530567 KDM3AQ9Y4C1 1321 aa23.82■■□□□ 1.4
CAPN1-220ENST00000530567 SLC26A4O43511 780 aa23.82■■□□□ 1.4
CAPN1-220ENST00000530567 CUTAO60888 179 aa23.82■■□□□ 1.4
CAPN1-220ENST00000530567 XRCC6P12956 609 aaKnown RBP eCLIP23.82■■□□□ 1.4
CAPN1-220ENST00000530567 UBA7P41226 1012 aa23.82■■□□□ 1.4
CAPN1-220ENST00000530567 RARRES1P49788 294 aa23.82■■□□□ 1.4
CAPN1-220ENST00000530567 CEP170P1Q96L14 293 aa23.82■■□□□ 1.4
CAPN1-220ENST00000530567 NACC1Q96RE7 527 aa23.82■■□□□ 1.4
CAPN1-220ENST00000530567 GDPD2Q9HCC8 539 aa23.82■■□□□ 1.4
CAPN1-220ENST00000530567 ZMYND8Q9ULU4 1186 aaPredicted RBP23.82■■□□□ 1.4
CAPN1-220ENST00000530567 EVPLQ92817 2033 aa23.81■■□□□ 1.4
CAPN1-220ENST00000530567 ME1P48163 572 aa23.81■■□□□ 1.4
CAPN1-220ENST00000530567 XKR9Q5GH70 373 aa23.81■■□□□ 1.4
CAPN1-220ENST00000530567 TAF2Q6P1X5 1199 aa23.81■■□□□ 1.4
CAPN1-220ENST00000530567 SHC4Q6S5L8 630 aa23.81■■□□□ 1.4
CAPN1-220ENST00000530567 OTUD6AQ7L8S5 288 aa23.81■■□□□ 1.4
CAPN1-220ENST00000530567 SCAND2PQ9GZW5 306 aaPredicted RBP23.81■■□□□ 1.4
CAPN1-220ENST00000530567 HIPK3Q9H422 1215 aa23.81■■□□□ 1.4
CAPN1-220ENST00000530567 DBR1Q9UK59 544 aaKnown RBP23.81■■□□□ 1.4
CAPN1-220ENST00000530567 TANC1Q9C0D5 1861 aa23.81■■□□□ 1.4
CAPN1-220ENST00000530567 IGKV6-21A0A0C4DH24 114 aa23.8■■□□□ 1.4
CAPN1-220ENST00000530567 MAGEB2O15479 319 aa23.8■■□□□ 1.4
CAPN1-220ENST00000530567 SYN1P17600 705 aa23.8■■□□□ 1.4
CAPN1-220ENST00000530567 TBC1D8BQ0IIM8 1120 aa23.8■■□□□ 1.4
CAPN1-220ENST00000530567 KARSQ15046 597 aaKnown RBP23.8■■□□□ 1.4
CAPN1-220ENST00000530567 ZRSR1Q15695 479 aaKnown RBP23.8■■□□□ 1.4
CAPN1-220ENST00000530567 TRAF7Q6Q0C0 670 aa23.8■■□□□ 1.4
CAPN1-220ENST00000530567 RPAINQ86UA6 219 aa23.8■■□□□ 1.4
CAPN1-220ENST00000530567 PLIN2Q99541 437 aa23.8■■□□□ 1.4
CAPN1-220ENST00000530567 PPP1R12CQ9BZL4 782 aa23.8■■□□□ 1.4
CAPN1-220ENST00000530567 DHX33Q9H6R0 707 aaKnown RBP23.8■■□□□ 1.4
CAPN1-220ENST00000530567 PPME1Q9Y570 386 aa23.8■■□□□ 1.4
CAPN1-220ENST00000530567 NR2E3Q9Y5X4 410 aa23.8■■□□□ 1.4
CAPN1-220ENST00000530567 SMIM35A0A1B0GVV1 85 aa23.79■■□□□ 1.4
CAPN1-220ENST00000530567 E9PMD0 336 aa23.79■■□□□ 1.4
CAPN1-220ENST00000530567 PITPNM1O00562 1244 aa23.79■■□□□ 1.4
CAPN1-220ENST00000530567 CAGE1Q8TC20 777 aa23.79■■□□□ 1.4
CAPN1-220ENST00000530567 FAM49AQ9H0Q0 323 aaPredicted RBP23.79■■□□□ 1.4
CAPN1-220ENST00000530567 WNT8AQ9H1J5 351 aa23.79■■□□□ 1.4
CAPN1-220ENST00000530567 LOXHD1Q8IVV2 1947 aa23.79■■□□□ 1.4
CAPN1-220ENST00000530567 CEP290O15078 2479 aa23.78■■□□□ 1.4
CAPN1-220ENST00000530567 A0A087X0B3 334 aa23.78■■□□□ 1.4
CAPN1-220ENST00000530567 MAFO75444 373 aaPredicted RBP23.78■■□□□ 1.4
CAPN1-220ENST00000530567 CKBP12277 381 aa23.78■■□□□ 1.4
CAPN1-220ENST00000530567 PLCG1P19174 1290 aa23.78■■□□□ 1.4
CAPN1-220ENST00000530567 CYP2C18P33260 490 aa23.78■■□□□ 1.4
CAPN1-220ENST00000530567 CLCN3P51790 818 aa23.78■■□□□ 1.4
CAPN1-220ENST00000530567 MKRN4PQ13434 485 aaPredicted RBP23.78■■□□□ 1.4
CAPN1-220ENST00000530567 DRP2Q13474 957 aa23.78■■□□□ 1.4
CAPN1-220ENST00000530567 KIAA0319LQ8IZA0 1049 aa23.78■■□□□ 1.4
CAPN1-220ENST00000530567 LRRC71Q8N4P6 559 aa23.78■■□□□ 1.4
CAPN1-220ENST00000530567 DNAJB3Q8WWF6 145 aa23.78■■□□□ 1.4
CAPN1-220ENST00000530567 NT5C3AQ9H0P0 336 aa23.78■■□□□ 1.4
CAPN1-220ENST00000530567 EYA4O95677 639 aa23.77■■□□□ 1.4
CAPN1-220ENST00000530567 TIMP1P01033 207 aa23.77■■□□□ 1.4
CAPN1-220ENST00000530567 THPOP40225 353 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms