RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 RGS18Q9NS28 235 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 EVPLQ92817 2033 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 TRIOO75962 3097 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 MGEA5O60502 916 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 NRIP1P48552 1158 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 NHLH1Q02575 133 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 UBE3AQ05086 875 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 AP3B2Q13367 1082 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 ZNF484Q5JVG2 852 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 ODR4Q5SWX8 454 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 FAM160B1Q5W0V3 765 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 NEK1Q96PY6 1258 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 ANO2Q9NQ90 1003 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 C1orf112Q9NSG2 853 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 TMEM260Q9NX78 707 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 BARHL2Q9NY43 387 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 BRPF3Q9ULD4 1205 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 NOC2LQ9Y3T9 749 aaKnown RBP17■□□□□ 0.31
CAPN1-219ENST00000530495 PCDHB12Q9Y5F1 795 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 COL1A2P08123 1366 aa17■□□□□ 0.31
CAPN1-219ENST00000530495 LOC730098B7Z3J9 87 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 DHX15O43143 795 aaKnown RBP16.99■□□□□ 0.31
CAPN1-219ENST00000530495 PPFIA3O75145 1194 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 RPS6KA5O75582 802 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 GLP2RO95838 553 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 ZNF76P36508 570 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 RTN1Q16799 776 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 RNF20Q5VTR2 975 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 SLC24A5Q71RS6 500 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 BMP8AQ7Z5Y6 402 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 RBM23Q86U06 439 aaKnown RBP16.99■□□□□ 0.31
CAPN1-219ENST00000530495 TMEM40Q8WWA1 233 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 ADAM2Q99965 735 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 TLE6Q9H808 572 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 AAASQ9NRG9 546 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 ST3GAL5Q9UNP4 418 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 GINS2Q9Y248 185 aa16.99■□□□□ 0.31
CAPN1-219ENST00000530495 DENND3A2RUS2 1198 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 ZBTB42B2RXF5 422 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 C9IYK1 514 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 FAM86B1E9PN63 330 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 DDX39AO00148 427 aaKnown RBP16.98■□□□□ 0.31
CAPN1-219ENST00000530495 BACH1O14867 736 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 GPR182O15218 404 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 ZBTB43O43298 467 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 CYP3A4P08684 503 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 FAM86B2P0C5J1 330 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 ATP4AP20648 1035 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 MRE11P49959 708 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 FAM189BP81408 668 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 TSGA10IPQ3SY00 556 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 FAM102BQ5T8I3 360 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 SWSAP1Q6NVH7 229 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 PDXDC2PQ6P474 469 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 DHX32Q7L7V1 743 aaKnown RBP16.98■□□□□ 0.31
CAPN1-219ENST00000530495 CCDC60Q8IWA6 550 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-219ENST00000530495 MICAL1Q8TDZ2 1067 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 CRYGNQ8WXF5 182 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 ZNF302Q9NR11 478 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 FAM217BQ9NTX9 383 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-219ENST00000530495 PCDHGC5Q9Y5F6 944 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 PIEZO1Q92508 2521 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 ZNF318Q5VUA4 2279 aa16.98■□□□□ 0.31
CAPN1-219ENST00000530495 MYH9P35579 1960 aaKnown RBP16.97■□□□□ 0.31
CAPN1-219ENST00000530495 IGLV3-22A0A075B6J6 115 aa16.97■□□□□ 0.31
CAPN1-219ENST00000530495 TBKBP1A7MCY6 615 aa16.97■□□□□ 0.31
CAPN1-219ENST00000530495 IPO5O00410 1097 aaKnown RBP16.97■□□□□ 0.31
CAPN1-219ENST00000530495 CRYBB1P53674 252 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-219ENST00000530495 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-219ENST00000530495 CBX2Q14781 532 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-219ENST00000530495 PDE12Q6L8Q7 609 aaKnown RBP16.97■□□□□ 0.31
CAPN1-219ENST00000530495 MIS18BP1Q6P0N0 1132 aa16.97■□□□□ 0.31
CAPN1-219ENST00000530495 PLA2G4DQ86XP0 818 aa16.97■□□□□ 0.31
CAPN1-219ENST00000530495 TLR9Q9NR96 1032 aa16.97■□□□□ 0.31
CAPN1-219ENST00000530495 TYW1Q9NV66 732 aaKnown RBP16.97■□□□□ 0.31
CAPN1-219ENST00000530495 BARX2Q9UMQ3 279 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-219ENST00000530495 USP15Q9Y4E8 981 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-219ENST00000530495 MAFBQ9Y5Q3 323 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-219ENST00000530495 TECTAO75443 2155 aa16.96■□□□□ 0.31
CAPN1-219ENST00000530495 FSD2A1L4K1 749 aa16.96■□□□□ 0.31
CAPN1-219ENST00000530495 PER2O15055 1255 aa16.96■□□□□ 0.31
CAPN1-219ENST00000530495 FGF18O76093 207 aa16.96■□□□□ 0.31
CAPN1-219ENST00000530495 ERVFC1P60507 584 aa16.96■□□□□ 0.31
CAPN1-219ENST00000530495 SPOUT1Q5T280 376 aaKnown RBP16.96■□□□□ 0.31
CAPN1-219ENST00000530495 TRIM67Q6ZTA4 783 aa16.96■□□□□ 0.31
CAPN1-219ENST00000530495 BBXQ8WY36 941 aaPredicted RBP16.96■□□□□ 0.31
CAPN1-219ENST00000530495 TCEANC2Q96MN5 208 aa16.96■□□□□ 0.31
CAPN1-219ENST00000530495 CDCA3Q99618 268 aaPredicted RBP16.96■□□□□ 0.31
CAPN1-219ENST00000530495 PHF7Q9BWX1 381 aaPredicted RBP16.96■□□□□ 0.31
CAPN1-219ENST00000530495 CWH43Q9H720 699 aa16.96■□□□□ 0.31
CAPN1-219ENST00000530495 ELAC1Q9H777 363 aaKnown RBP16.96■□□□□ 0.31
CAPN1-219ENST00000530495 TBC1D22BQ9NU19 505 aa16.96■□□□□ 0.31
CAPN1-219ENST00000530495 TMEM161AQ9NX61 479 aa16.96■□□□□ 0.31
CAPN1-219ENST00000530495 WDFY4Q6ZS81 3184 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 GPR32O75388 356 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 C22orf31O95567 290 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 ATF7P17544 494 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-219ENST00000530495 IBSPP21815 317 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-219ENST00000530495 CDC27P30260 824 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 RCAN1P53805 252 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms