RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 ZSWIM6Q9HCJ5 1215 aa23.68■■□□□ 1.38
SMPD1-204ENST00000530395 SH3GLB2Q9NR46 395 aa23.68■■□□□ 1.38
SMPD1-204ENST00000530395 GINS2Q9Y248 185 aa23.68■■□□□ 1.38
SMPD1-204ENST00000530395 PCDHA10Q9Y5I2 948 aa23.68■■□□□ 1.38
SMPD1-204ENST00000530395 CEP131Q9UPN4 1083 aa23.67■■□□□ 1.38
SMPD1-204ENST00000530395 SAMM50Q9Y512 469 aa23.67■■□□□ 1.38
SMPD1-204ENST00000530395 MAFBQ9Y5Q3 323 aaPredicted RBP23.67■■□□□ 1.38
SMPD1-204ENST00000530395 CPLX1O14810 134 aa23.66■■□□□ 1.38
SMPD1-204ENST00000530395 RPS6KA5O75582 802 aa23.66■■□□□ 1.38
SMPD1-204ENST00000530395 NLRP5P59047 1200 aa23.66■■□□□ 1.38
SMPD1-204ENST00000530395 SSRP1Q08945 709 aaKnown RBP23.66■■□□□ 1.38
SMPD1-204ENST00000530395 NFX1Q12986 1120 aaKnown RBP23.66■■□□□ 1.38
SMPD1-204ENST00000530395 TCEAL5Q5H9L2 206 aa23.66■■□□□ 1.38
SMPD1-204ENST00000530395 RTN4RL1Q86UN2 441 aaPredicted RBP23.66■■□□□ 1.38
SMPD1-204ENST00000530395 CMTR2Q8IYT2 770 aaKnown RBP23.66■■□□□ 1.38
SMPD1-204ENST00000530395 KIAA0319LQ8IZA0 1049 aa23.66■■□□□ 1.38
SMPD1-204ENST00000530395 FAM167AQ96KS9 214 aa23.66■■□□□ 1.38
SMPD1-204ENST00000530395 PLVAPQ9BX97 442 aa23.66■■□□□ 1.38
SMPD1-204ENST00000530395 RNF216Q9NWF9 866 aaPredicted RBP23.66■■□□□ 1.38
SMPD1-204ENST00000530395 LRFN2Q9ULH4 789 aa23.66■■□□□ 1.38
SMPD1-204ENST00000530395 MYO7AQ13402 2215 aa23.65■■□□□ 1.38
SMPD1-204ENST00000530395 WDR64B1ANS9 1081 aa23.65■■□□□ 1.38
SMPD1-204ENST00000530395 ZBTB42B2RXF5 422 aa23.65■■□□□ 1.38
SMPD1-204ENST00000530395 NEFLP07196 543 aa23.65■■□□□ 1.38
SMPD1-204ENST00000530395 LINC00271P0C7V0 271 aa23.65■■□□□ 1.38
SMPD1-204ENST00000530395 ATP4AP20648 1035 aa23.65■■□□□ 1.38
SMPD1-204ENST00000530395 USP11P51784 963 aa23.65■■□□□ 1.38
SMPD1-204ENST00000530395 TOB2Q14106 344 aaPredicted RBP23.65■■□□□ 1.38
SMPD1-204ENST00000530395 TMEM266Q2M3C6 531 aa23.65■■□□□ 1.38
SMPD1-204ENST00000530395 PUS10Q3MIT2 529 aaKnown RBP23.65■■□□□ 1.38
SMPD1-204ENST00000530395 CPLX2Q6PUV4 134 aaKnown RBP23.65■■□□□ 1.38
SMPD1-204ENST00000530395 C1QTNF1Q9BXJ1 281 aa23.65■■□□□ 1.38
SMPD1-204ENST00000530395 C22orf23Q9BZE7 217 aa23.65■■□□□ 1.38
SMPD1-204ENST00000530395 TM6SF1Q9BZW5 370 aa23.65■■□□□ 1.38
SMPD1-204ENST00000530395 GABBR1Q9UBS5 961 aa23.65■■□□□ 1.38
SMPD1-204ENST00000530395 NCK2O43639 380 aa23.64■■□□□ 1.37
SMPD1-204ENST00000530395 C22orf31O95567 290 aa23.64■■□□□ 1.37
SMPD1-204ENST00000530395 CRIPAKQ8N1N5 446 aa23.64■■□□□ 1.37
SMPD1-204ENST00000530395 METTL13Q8N6R0 699 aa23.64■■□□□ 1.37
SMPD1-204ENST00000530395 LENG9Q96B70 501 aa23.64■■□□□ 1.37
SMPD1-204ENST00000530395 PABPC5Q96DU9 382 aaKnown RBP23.64■■□□□ 1.37
SMPD1-204ENST00000530395 ZNF274Q96GC6 653 aaPredicted RBP23.64■■□□□ 1.37
SMPD1-204ENST00000530395 TMX1Q9H3N1 280 aa23.64■■□□□ 1.37
SMPD1-204ENST00000530395 ERVK-5Q9HDB9 667 aa23.64■■□□□ 1.37
SMPD1-204ENST00000530395 GPR182O15218 404 aa23.63■■□□□ 1.37
SMPD1-204ENST00000530395 GRM6O15303 877 aa23.63■■□□□ 1.37
SMPD1-204ENST00000530395 DEXIO95424 95 aa23.63■■□□□ 1.37
SMPD1-204ENST00000530395 SARSP49591 514 aaKnown RBP23.63■■□□□ 1.37
SMPD1-204ENST00000530395 PTCRAQ6ISU1 281 aaPredicted RBP23.63■■□□□ 1.37
SMPD1-204ENST00000530395 EP400NLQ6ZTU2 488 aa23.63■■□□□ 1.37
SMPD1-204ENST00000530395 TRMT1LQ7Z2T5 733 aaKnown RBP23.63■■□□□ 1.37
SMPD1-204ENST00000530395 RIT2Q99578 217 aa23.63■■□□□ 1.37
SMPD1-204ENST00000530395 PCDHA4Q9UN74 947 aa23.63■■□□□ 1.37
SMPD1-204ENST00000530395 NOC2LQ9Y3T9 749 aaKnown RBP23.63■■□□□ 1.37
SMPD1-204ENST00000530395 MRPL42Q9Y6G3 142 aaKnown RBP23.63■■□□□ 1.37
SMPD1-204ENST00000530395 DENND3A2RUS2 1198 aa23.62■■□□□ 1.37
SMPD1-204ENST00000530395 MSH4O15457 936 aa23.62■■□□□ 1.37
SMPD1-204ENST00000530395 MAGEB2O15479 319 aa23.62■■□□□ 1.37
SMPD1-204ENST00000530395 GAS7O60861 476 aa23.62■■□□□ 1.37
SMPD1-204ENST00000530395 COL9A1P20849 921 aa23.62■■□□□ 1.37
SMPD1-204ENST00000530395 IBSPP21815 317 aaPredicted RBP23.62■■□□□ 1.37
SMPD1-204ENST00000530395 CRYBB1P53674 252 aaPredicted RBP23.62■■□□□ 1.37
SMPD1-204ENST00000530395 KIZQ2M2Z5 673 aa23.62■■□□□ 1.37
SMPD1-204ENST00000530395 PAN2Q504Q3 1202 aaKnown RBP23.62■■□□□ 1.37
SMPD1-204ENST00000530395 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.62■■□□□ 1.37
SMPD1-204ENST00000530395 NEK9Q8TD19 979 aa23.62■■□□□ 1.37
SMPD1-204ENST00000530395 P2RX5Q93086 422 aa23.62■■□□□ 1.37
SMPD1-204ENST00000530395 DISC1Q9NRI5 854 aa23.62■■□□□ 1.37
SMPD1-204ENST00000530395 C1orf112Q9NSG2 853 aa23.62■■□□□ 1.37
SMPD1-204ENST00000530395 FAM50BQ9Y247 325 aa23.62■■□□□ 1.37
SMPD1-204ENST00000530395 PCDHB7Q9Y5E2 793 aa23.62■■□□□ 1.37
SMPD1-204ENST00000530395 MMP1P03956 469 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 TMOD1P28289 359 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 SFNP31947 248 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 JAK3P52333 1124 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 NAALADL2Q58DX5 795 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 LRCH2Q5VUJ6 765 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 FAM177A1Q8N128 213 aaPredicted RBP23.61■■□□□ 1.37
SMPD1-204ENST00000530395 TBCKQ8TEA7 893 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 MAP7D2Q96T17 732 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 PPP1R16BQ96T49 567 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 OSMRQ99650 979 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 TEKT3Q9BXF9 490 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 UPF3BQ9BZI7 483 aaKnown RBP23.61■■□□□ 1.37
SMPD1-204ENST00000530395 CDHR5Q9HBB8 845 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 NRBP2Q9NSY0 501 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 CLDND1Q9NY35 253 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 ST3GAL5Q9UNP4 418 aa23.61■■□□□ 1.37
SMPD1-204ENST00000530395 FNDC1Q4ZHG4 1894 aaPredicted RBP23.61■■□□□ 1.37
SMPD1-204ENST00000530395 H3BQ06 376 aaPredicted RBP23.6■■□□□ 1.37
SMPD1-204ENST00000530395 CHMP2AO43633 222 aa23.6■■□□□ 1.37
SMPD1-204ENST00000530395 VTNP04004 478 aa23.6■■□□□ 1.37
SMPD1-204ENST00000530395 OATP04181 439 aa23.6■■□□□ 1.37
SMPD1-204ENST00000530395 COL19A1Q14993 1142 aa23.6■■□□□ 1.37
SMPD1-204ENST00000530395 ZNF710Q8N1W2 664 aa23.6■■□□□ 1.37
SMPD1-204ENST00000530395 TMEM40Q8WWA1 233 aa23.6■■□□□ 1.37
SMPD1-204ENST00000530395 SLC5A5Q92911 643 aa23.6■■□□□ 1.37
SMPD1-204ENST00000530395 ADAM2Q99965 735 aa23.6■■□□□ 1.37
SMPD1-204ENST00000530395 ALG13Q9NP73 1137 aaKnown RBP23.6■■□□□ 1.37
SMPD1-204ENST00000530395 RGS18Q9NS28 235 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms