RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 NCOA3Q9Y6Q9 1424 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 KRT3P12035 628 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 DIXDC1Q155Q3 683 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 KCTD1Q719H9 257 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 EDEM3Q9BZQ6 932 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 ANKFY1Q9P2R3 1169 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 SLC26A4O43511 780 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 EXOSC10Q01780 885 aaKnown RBP16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 ACTN3Q08043 901 aaPredicted RBP16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 NYAP1Q6ZVC0 841 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 CENPUQ71F23 418 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 CNPY4Q8N129 248 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 BBS5Q8N3I7 341 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 SUGCTQ9HAC7 445 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 MEFVO15553 781 aaPredicted RBP16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 USP17L8P0C7I0 530 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 DNAJC24Q6P3W2 148 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 ELMSAN1Q6PJG2 1045 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 RASGRP2Q7LDG7 609 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 FAM20AQ96MK3 541 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 PCIF1Q9H4Z3 704 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 CFAP73A6NFT4 308 aa16.58■□□□□ 0.25
PCDHA4-203ENST00000530339 NCK2O43639 380 aa16.58■□□□□ 0.25
PCDHA4-203ENST00000530339 PPP1R37O75864 691 aa16.58■□□□□ 0.25
PCDHA4-203ENST00000530339 TRIM28Q13263 835 aaKnown RBP16.58■□□□□ 0.25
PCDHA4-203ENST00000530339 EP400NLQ6ZTU2 488 aa16.58■□□□□ 0.25
PCDHA4-203ENST00000530339 CHMP6Q96FZ7 201 aa16.58■□□□□ 0.25
PCDHA4-203ENST00000530339 LRGUKQ96M69 825 aa16.58■□□□□ 0.25
PCDHA4-203ENST00000530339 KLC4Q9NSK0 619 aa16.58■□□□□ 0.25
PCDHA4-203ENST00000530339 NR1H3Q13133 447 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 DRP2Q13474 957 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 AP5M1Q9H0R1 490 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 CCDC68Q9H2F9 335 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 SPATA31A3Q5VYP0 1347 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 CPP00450 1065 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 PMS2P54278 862 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 CAV1Q03135 178 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 SUSD4Q5VX71 490 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 DPP9Q86TI2 863 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 MORC4Q8TE76 937 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 CEP170P1Q96L14 293 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 LIMA1Q9UHB6 759 aaKnown RBP16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 PNPLA7Q6ZV29 1317 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 ESRRGP62508 458 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 BASP1P80723 227 aaKnown RBP16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 LRRC23Q53EV4 343 aaPredicted RBP16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 KRT39Q6A163 491 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 NCAPG2Q86XI2 1143 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 PDIK1LQ8N165 341 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 SLITRK6Q9H5Y7 841 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 STOML1Q9UBI4 398 aa16.58■□□□□ 0.24
PCDHA4-203ENST00000530339 SYT2Q8N9I0 419 aaPredicted RBP16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 DDX47Q9H0S4 455 aaKnown RBP16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 TUBE1Q9UJT0 475 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 SNX12Q9UMY4 172 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 MYO3BQ8WXR4 1341 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 WDR91A4D1P6 747 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 HDLBPQ00341 1268 aaKnown RBP16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 GRM4Q14833 912 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 STOX1Q6ZVD7 989 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 BZW1Q7L1Q6 419 aaKnown RBP16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 SEL1LQ9UBV2 794 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 ARHGEF40Q8TER5 1519 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 SLC16A2P36021 539 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 ST13P4Q8IZP2 240 aaPredicted RBP16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 DYNLL2Q96FJ2 89 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 CACYBPQ9HB71 228 aaKnown RBP16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 DNAJC17Q9NVM6 304 aaKnown RBP16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 DNAJC12Q9UKB3 198 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 IQANK1A0A1B0GTG1 560 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 RPS6KA4O75676 772 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 TTC4O95801 387 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 GSTA1P08263 222 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 GSTA2P09210 222 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 PLS3P13797 630 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 PYROXD1Q8WU10 500 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 TRIM55Q9BYV6 548 aa16.57■□□□□ 0.24
PCDHA4-203ENST00000530339 USP17L3A6NCW0 530 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 USP17L4A6NCW7 530 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 ZBTB5O15062 677 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 BBS9Q3SYG4 887 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 USP17L1Q7RTZ2 530 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 CENPKQ9BS16 269 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 ITIH6Q6UXX5 1313 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 TRIM66O15016 1216 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 TTI1O43156 1089 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 OATP04181 439 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 ATG16L1Q676U5 607 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 GUF1Q8N442 669 aaKnown RBP16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 ISCA1Q9BUE6 129 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 TMEM60Q9H2L4 133 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 ABCA6Q8N139 1617 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 RASA4BC9J798 803 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 SPECC1L-ADORA2AF8WAN1 911 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 RASA4O43374 803 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 ADRA2BP18089 450 aa16.56■□□□□ 0.24
PCDHA4-203ENST00000530339 UBE2SQ16763 222 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms