RNA–Protein interactions for RNA: ENST00000530120.5

CSRP1-213, Transcript of cysteine and glycine rich protein 1, human

TSL 4

Gene CSRP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSRP1-213	ENST00000530120	LRRC2	Q9BYS8	371 aa		13.65	□□□□□ -0.22
CSRP1-213	ENST00000530120	ANO3	Q9BYT9	981 aa		13.65	□□□□□ -0.22
CSRP1-213	ENST00000530120	RC3H2	Q9HBD1	1191 aa	Known RBP	13.65	□□□□□ -0.22
CSRP1-213	ENST00000530120	NID2	Q14112	1375 aa		13.65	□□□□□ -0.22
CSRP1-213	ENST00000530120	PLXNA4	Q9HCM2	1894 aa		13.65	□□□□□ -0.22
CSRP1-213	ENST00000530120	MYO15A	Q9UKN7	3530 aa		13.65	□□□□□ -0.22
CSRP1-213	ENST00000530120	hCG_1642624	A0A1W2PR95	340 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	ESYT2	A0FGR8	921 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	FSD2	A1L4K1	749 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	ENPP3	O14638	875 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	DGKI	O75912	1065 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	ITGB1	P05556	798 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	MARK3	P27448	753 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	MRPS6	P82932	125 aa	Known RBP	13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	SET	Q01105	290 aa	Predicted RBP	13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	LPIN1	Q14693	890 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	PTPN21	Q16825	1174 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	FBXO47	Q5MNV8	452 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	MARCH8	Q5T0T0	291 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	RUFY4	Q6ZNE9	571 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	ERMP1	Q7Z2K6	904 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	CMTR2	Q8IYT2	770 aa	Known RBP	13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	MICAL1	Q8TDZ2	1067 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	POF1B	Q8WVV4	589 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	ZNF689	Q96CS4	500 aa	Predicted RBP	13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	ASIC4	Q96FT7	647 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	TLE6	Q9H808	572 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	RNF216	Q9NWF9	866 aa	Predicted RBP	13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	TRPC6	Q9Y210	931 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	MRPL42	Q9Y6G3	142 aa	Known RBP	13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	KDM3A	Q9Y4C1	1321 aa		13.64	□□□□□ -0.23
CSRP1-213	ENST00000530120	COL1A2	P08123	1366 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	LOXHD1	Q8IVV2	1947 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	KLF18	A0A0U1RQI7	1052 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	PROB1	E7EW31	1015 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	MEIS1	O00470	390 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	GALR2	O43603	387 aa	Predicted RBP	13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	SRGAP2B	P0DMP2	458 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	INSRR	P14616	1297 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	ATF7	P17544	494 aa	Predicted RBP	13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	DNAJB1	P25685	340 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	CLK2	P49760	499 aa	Known RBP	13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	ACTR2	P61160	394 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	FGD1	P98174	961 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	CAMK1	Q14012	370 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	COL9A3	Q14050	684 aa	Predicted RBP	13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	PAN2	Q504Q3	1202 aa	Known RBP	13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	RAB11FIP4	Q86YS3	637 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	NME8	Q8N427	588 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	FBXL16	Q8N461	479 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	KLHL23	Q8NBE8	558 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	SPPL3	Q8TCT6	385 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	AGO4	Q9HCK5	861 aa	Known RBP	13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	PKD2L1	Q9P0L9	805 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	TELO2	Q9Y4R8	837 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	PCDHA2	Q9Y5H9	948 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	CDY2A	Q9Y6F7	541 aa		13.63	□□□□□ -0.23
CSRP1-213	ENST00000530120	SMIM35	A0A1B0GVV1	85 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	PRR23A	A6NEV1	266 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	SMCO2	A6NFE2	343 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	PPFIA3	O75145	1194 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	ATG7	O95352	703 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	GLP2R	O95838	553 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	STAG3L1	P0CL83	205 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	METAP2	P50579	478 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	STAT5B	P51692	787 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	PFKFB3	Q16875	520 aa	Predicted RBP	13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	ODR4	Q5SWX8	454 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	SPOUT1	Q5T280	376 aa	Known RBP	13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	FAM160B1	Q5W0V3	765 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	TYW1B	Q6NUM6	668 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	ASCL5	Q7RTU5	278 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	NPAS4	Q8IUM7	802 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	DNAJB3	Q8WWF6	145 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	RIPOR3	Q96MK2	946 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	PCYT2	Q99447	389 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	TCEAL9	Q9UHQ7	104 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	BRPF3	Q9ULD4	1205 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	TRPV2	Q9Y5S1	764 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120		V9GY48	417 aa	Predicted RBP	13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	IGSF9B	Q9UPX0	1349 aa		13.62	□□□□□ -0.23
CSRP1-213	ENST00000530120	IGKV6D-21	A0A0A0MT36	114 aa		13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	CYP3A4	P08684	503 aa		13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	SCG2	P13521	617 aa		13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	ZNF76	P36508	570 aa		13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	IGBP1	P78318	339 aa		13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	ITGB3BP	Q13352	177 aa	Predicted RBP	13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	PLCB4	Q15147	1175 aa		13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	RASEF	Q8IZ41	740 aa		13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	BICD2	Q8TD16	824 aa		13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	KCNB2	Q92953	911 aa		13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	ZMYND12	Q9H0C1	365 aa		13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	TBC1D22B	Q9NU19	505 aa		13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	LRFN2	Q9ULH4	789 aa		13.61	□□□□□ -0.23
CSRP1-213	ENST00000530120	MYO10	Q9HD67	2058 aa		13.6	□□□□□ -0.23
CSRP1-213	ENST00000530120	GVINP1	Q7Z2Y8	2422 aa		13.6	□□□□□ -0.23
CSRP1-213	ENST00000530120	PER2	O15055	1255 aa		13.6	□□□□□ -0.23
CSRP1-213	ENST00000530120	EPB41L2	O43491	1005 aa	Known RBP	13.6	□□□□□ -0.23
CSRP1-213	ENST00000530120	HBP1	O60381	514 aa		13.6	□□□□□ -0.23
CSRP1-213	ENST00000530120	IBSP	P21815	317 aa	Predicted RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms