RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 FSCN2O14926 492 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 RPLP2P05387 115 aaKnown RBP12.95□□□□□ -0.34
SF3B2-208ENST00000529994 FGFR1P11362 822 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 ANTXR2P58335 489 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 SART3Q15020 963 aaKnown RBP12.95□□□□□ -0.34
SF3B2-208ENST00000529994 SYCE2Q6PIF2 218 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 KREMEN2Q8NCW0 462 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 NCOA7Q8NI08 942 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 CTCFLQ8NI51 663 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-208ENST00000529994 PPP1R16BQ96T49 567 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 CDCA3Q99618 268 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-208ENST00000529994 ADAM2Q99965 735 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 ESYT1Q9BSJ8 1104 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 SPZ1Q9BXG8 430 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 SMOC2Q9H3U7 446 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 ANO2Q9NQ90 1003 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 ENTPD7Q9NQZ7 604 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 SLC9A2Q9UBY0 812 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 NOC2LQ9Y3T9 749 aaKnown RBP12.95□□□□□ -0.34
SF3B2-208ENST00000529994 HIDE1A8MVS5 230 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 GALR2O43603 387 aaPredicted RBP12.94□□□□□ -0.34
SF3B2-208ENST00000529994 RPS6KA5O75582 802 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 PLEKHA8P1O95397 391 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 BRD1O95696 1058 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 SRGAP2BP0DMP2 458 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 PBX3P40426 434 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 MTHFD1LQ6UB35 978 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 SRBD1Q8N5C6 995 aaKnown RBP12.94□□□□□ -0.34
SF3B2-208ENST00000529994 CYP2W1Q8TAV3 490 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 IGDCC4Q8TDY8 1250 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 TMEM40Q8WWA1 233 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 TCF25Q9BQ70 676 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 ERVK-5Q9HDB9 667 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 JADE2Q9NQC1 790 aa12.94□□□□□ -0.34
SF3B2-208ENST00000529994 KDM3AQ9Y4C1 1321 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 SMIM35A0A1B0GVV1 85 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 SPDYE3A6NKU9 549 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 RXRAP19793 462 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 KLRC1P26715 233 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 STAT5BP51692 787 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 ACTR2P61160 394 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 KCNC3Q14003 757 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 TMEM184AQ6ZMB5 413 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 SLC24A5Q71RS6 500 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 RAB11FIP4Q86YS3 637 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 ZNF654Q8IZM8 581 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 CCDC82Q8N4S0 544 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 TMEM105Q8N8V8 129 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 MRPS27Q92552 414 aaKnown RBP12.93□□□□□ -0.34
SF3B2-208ENST00000529994 MAP4K1Q92918 833 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 LSG1Q9H089 658 aaKnown RBP12.93□□□□□ -0.34
SF3B2-208ENST00000529994 CWH43Q9H720 699 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 RGS18Q9NS28 235 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 KCNH7Q9NS40 1196 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 PCDHA6Q9UN73 950 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 ST3GAL5Q9UNP4 418 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 PCDHA8Q9Y5H6 950 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 WDR87Q6ZQQ6 2873 aa12.93□□□□□ -0.34
SF3B2-208ENST00000529994 FSD2A1L4K1 749 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 PRR23AA6NEV1 266 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 C2CD4DB7Z1M9 353 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 C9IYK1 514 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 DDX39AO00148 427 aaKnown RBP12.92□□□□□ -0.34
SF3B2-208ENST00000529994 WEE2P0C1S8 567 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 ARP10275 920 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 KIF5BP33176 963 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 MTMR3Q13615 1198 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 BMP2KLQ5H9B9 411 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 PDE12Q6L8Q7 609 aaKnown RBP12.92□□□□□ -0.34
SF3B2-208ENST00000529994 LRRC55Q6ZSA7 311 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 PLPPR4Q7Z2D5 763 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 NME8Q8N427 588 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 TNPO1Q92973 898 aaKnown RBP12.92□□□□□ -0.34
SF3B2-208ENST00000529994 PGBD1Q96JS3 809 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 SDF4Q9BRK5 362 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 POMKQ9H5K3 350 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 ATP6V0A4Q9HBG4 840 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 LY9Q9HBG7 655 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 C1orf112Q9NSG2 853 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 PUF60Q9UHX1 559 aaKnown RBP12.92□□□□□ -0.34
SF3B2-208ENST00000529994 SORCS3Q9UPU3 1222 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 NR2E1Q9Y466 385 aa12.92□□□□□ -0.34
SF3B2-208ENST00000529994 PROB1E7EW31 1015 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 BACH1O14867 736 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 SLC27A2O14975 620 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 MAFGO15525 162 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 ASGR2P07307 311 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 LAG3P18627 525 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 CA8P35219 290 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 FOXK2Q01167 660 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 ITGB3BPQ13352 177 aaPredicted RBP12.91□□□□□ -0.34
SF3B2-208ENST00000529994 KIZQ2M2Z5 673 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 CASC1Q6TDU7 716 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 NFXL1Q6ZNB6 911 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 TMC7Q7Z402 723 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 FRMD5Q7Z6J6 570 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 MB21D2Q8IYB1 491 aaPredicted RBP12.91□□□□□ -0.34
SF3B2-208ENST00000529994 KIAA0319LQ8IZA0 1049 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 OSMRQ99650 979 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 MXRA8Q9BRK3 442 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms