RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 LENG9Q96B70 501 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 LMAN2LQ9H0V9 348 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 RC3H2Q9HBD1 1191 aaKnown RBP16.06■□□□□ 0.16
CAPN1-212ENST00000527887 NRBP2Q9NSY0 501 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 MICAL3Q7RTP6 2002 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 KAT6AQ92794 2004 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 CYP3A7-CYP3A51PA0A087WV96 503 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-212ENST00000527887 ADAMTS3O15072 1205 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 GPR182O15218 404 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 NCK2O43639 380 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 DGKIO75912 1065 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 CYP3A7P24462 503 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 TMOD1P28289 359 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 BTG3Q14201 252 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-212ENST00000527887 Q4G0T1 1027 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 NAALADL2Q58DX5 795 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 MOXD1Q6UVY6 613 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 BLIDQ8IZY5 108 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 RASGRP4Q8TDF6 673 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 ZBTB10Q96DT7 871 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 C11orf84Q9BUA3 381 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-212ENST00000527887 PLVAPQ9BX97 442 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
CAPN1-212ENST00000527887 DISC1Q9NRI5 854 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 GABBR1Q9UBS5 961 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 SAMM50Q9Y512 469 aa16.05■□□□□ 0.16
CAPN1-212ENST00000527887 ZBTB42B2RXF5 422 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 M0R2N6 131 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 MSH4O15457 936 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 GAS7O60861 476 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 RPS6KA5O75582 802 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 XBP1P17861 261 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 JAK3P52333 1124 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 CRYBB1P53674 252 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-212ENST00000527887 TMEM62Q0P6H9 643 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 ANKRD1Q15327 319 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 RTN4RL1Q86UN2 441 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-212ENST00000527887 CMTR2Q8IYT2 770 aaKnown RBP16.04■□□□□ 0.16
CAPN1-212ENST00000527887 CRIPAKQ8N1N5 446 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 BANK1Q8NDB2 785 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 TBCKQ8TEA7 893 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 SLC5A5Q92911 643 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 C1orf112Q9NSG2 853 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 NCOR1O75376 2440 aa16.04■□□□□ 0.16
CAPN1-212ENST00000527887 EDIL3O43854 480 aa16.03■□□□□ 0.16
CAPN1-212ENST00000527887 PPFIA3O75145 1194 aa16.03■□□□□ 0.16
CAPN1-212ENST00000527887 C22orf31O95567 290 aa16.03■□□□□ 0.16
CAPN1-212ENST00000527887 CTNNB1P35222 781 aa16.03■□□□□ 0.16
CAPN1-212ENST00000527887 KCNQ1P51787 676 aa16.03■□□□□ 0.16
CAPN1-212ENST00000527887 PUS10Q3MIT2 529 aaKnown RBP16.03■□□□□ 0.16
CAPN1-212ENST00000527887 LRCH2Q5VUJ6 765 aa16.03■□□□□ 0.16
CAPN1-212ENST00000527887 LINC01599Q8WXQ3 324 aa16.03■□□□□ 0.16
CAPN1-212ENST00000527887 P2RX5Q93086 422 aa16.03■□□□□ 0.16
CAPN1-212ENST00000527887 TEKT3Q9BXF9 490 aa16.03■□□□□ 0.16
CAPN1-212ENST00000527887 UBE2ZQ9H832 354 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-212ENST00000527887 ERVK-5Q9HDB9 667 aa16.03■□□□□ 0.16
CAPN1-212ENST00000527887 LINC00271P0C7V0 271 aa16.02■□□□□ 0.16
CAPN1-212ENST00000527887 SARSP49591 514 aaKnown RBP16.02■□□□□ 0.16
CAPN1-212ENST00000527887 CDC42EP1Q00587 391 aa16.02■□□□□ 0.16
CAPN1-212ENST00000527887 NFX1Q12986 1120 aaKnown RBP16.02■□□□□ 0.16
CAPN1-212ENST00000527887 NONOQ15233 471 aaKnown RBP eCLIP16.02■□□□□ 0.16
CAPN1-212ENST00000527887 LEXMQ3ZCV2 418 aa16.02■□□□□ 0.16
CAPN1-212ENST00000527887 KRT25Q7Z3Z0 450 aa16.02■□□□□ 0.16
CAPN1-212ENST00000527887 MBOAT7Q96N66 472 aa16.02■□□□□ 0.16
CAPN1-212ENST00000527887 SLKQ9H2G2 1235 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-212ENST00000527887 NSUN3Q9H649 340 aaKnown RBP16.02■□□□□ 0.16
CAPN1-212ENST00000527887 RGS18Q9NS28 235 aa16.02■□□□□ 0.16
CAPN1-212ENST00000527887 LRFN2Q9ULH4 789 aa16.02■□□□□ 0.16
CAPN1-212ENST00000527887 GINS2Q9Y248 185 aa16.02■□□□□ 0.16
CAPN1-212ENST00000527887 STK36Q9NRP7 1315 aa16.01■□□□□ 0.15
CAPN1-212ENST00000527887 PSMD10O75832 226 aa16.01■□□□□ 0.15
CAPN1-212ENST00000527887 OATP04181 439 aa16.01■□□□□ 0.15
CAPN1-212ENST00000527887 STK3Q13188 491 aa16.01■□□□□ 0.15
CAPN1-212ENST00000527887 COL19A1Q14993 1142 aa16.01■□□□□ 0.15
CAPN1-212ENST00000527887 SLC24A5Q71RS6 500 aa16.01■□□□□ 0.15
CAPN1-212ENST00000527887 METTL13Q8N6R0 699 aa16.01■□□□□ 0.15
CAPN1-212ENST00000527887 UIMC1Q96RL1 719 aa16.01■□□□□ 0.15
CAPN1-212ENST00000527887 MAP7D2Q96T17 732 aa16.01■□□□□ 0.15
CAPN1-212ENST00000527887 NAP1L4Q99733 375 aaKnown RBP16.01■□□□□ 0.15
CAPN1-212ENST00000527887 TMX1Q9H3N1 280 aa16.01■□□□□ 0.15
CAPN1-212ENST00000527887 ST3GAL5Q9UNP4 418 aa16.01■□□□□ 0.15
CAPN1-212ENST00000527887 NOC2LQ9Y3T9 749 aaKnown RBP16.01■□□□□ 0.15
CAPN1-212ENST00000527887 PCDHB7Q9Y5E2 793 aa16.01■□□□□ 0.15
CAPN1-212ENST00000527887 DENND3A2RUS2 1198 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 ZNF862O60290 1169 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 PFKFB2O60825 505 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 GPR32O75388 356 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 SCRN1Q12765 414 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 NPY5RQ15761 445 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 KIZQ2M2Z5 673 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 EFCAB12Q6NXP0 572 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 B3GNT9Q6UX72 402 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 LINC01465Q8N7H1 131 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 WASF1Q92558 559 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 PABPC5Q96DU9 382 aaKnown RBP16■□□□□ 0.15
CAPN1-212ENST00000527887 PHF20Q9BVI0 1012 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 ELAC1Q9H777 363 aaKnown RBP16■□□□□ 0.15
CAPN1-212ENST00000527887 CDHR5Q9HBB8 845 aa16■□□□□ 0.15
CAPN1-212ENST00000527887 SIP14410 1827 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms