RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 MGAT3Q09327 533 aa19.35■□□□□ 0.69
LMX1B-203ENST00000526117 MBTPS1Q14703 1052 aa19.35■□□□□ 0.69
LMX1B-203ENST00000526117 ANO5Q75V66 913 aa19.35■□□□□ 0.69
LMX1B-203ENST00000526117 EXOC8Q8IYI6 725 aa19.35■□□□□ 0.69
LMX1B-203ENST00000526117 TRAPPC12Q8WVT3 735 aa19.35■□□□□ 0.69
LMX1B-203ENST00000526117 HERVK_113Q902F9 699 aa19.35■□□□□ 0.69
LMX1B-203ENST00000526117 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.35■□□□□ 0.69
LMX1B-203ENST00000526117 FOXD4L1Q9NU39 408 aa19.35■□□□□ 0.69
LMX1B-203ENST00000526117 PCDH10Q9P2E7 1040 aa19.35■□□□□ 0.69
LMX1B-203ENST00000526117 WRAP73Q9P2S5 460 aaPredicted RBP19.35■□□□□ 0.69
LMX1B-203ENST00000526117 LAMA2P24043 3122 aaKnown RBP19.35■□□□□ 0.69
LMX1B-203ENST00000526117 IGKV6-21A0A0C4DH24 114 aa19.34■□□□□ 0.69
LMX1B-203ENST00000526117 XRCC6P12956 609 aaKnown RBP eCLIP19.34■□□□□ 0.69
LMX1B-203ENST00000526117 RPA1P27694 616 aa19.34■□□□□ 0.69
LMX1B-203ENST00000526117 TECP42680 631 aa19.34■□□□□ 0.69
LMX1B-203ENST00000526117 SHHQ15465 462 aa19.34■□□□□ 0.69
LMX1B-203ENST00000526117 HABP4Q5JVS0 413 aaKnown RBP19.34■□□□□ 0.69
LMX1B-203ENST00000526117 IER5Q5VY09 327 aa19.34■□□□□ 0.69
LMX1B-203ENST00000526117 OTUD6AQ7L8S5 288 aa19.34■□□□□ 0.69
LMX1B-203ENST00000526117 ERMNQ8TAM6 284 aa19.34■□□□□ 0.69
LMX1B-203ENST00000526117 DYDC2Q96IM9 177 aa19.34■□□□□ 0.69
LMX1B-203ENST00000526117 JPH2Q9BR39 696 aaPredicted RBP19.34■□□□□ 0.69
LMX1B-203ENST00000526117 RGL1Q9NZL6 768 aa19.34■□□□□ 0.69
LMX1B-203ENST00000526117 NBNO60934 754 aa19.33■□□□□ 0.68
LMX1B-203ENST00000526117 BAIAP3O94812 1187 aa19.33■□□□□ 0.68
LMX1B-203ENST00000526117 FGBP02675 491 aa19.33■□□□□ 0.68
LMX1B-203ENST00000526117 YWHABP31946 246 aaKnown RBP19.33■□□□□ 0.68
LMX1B-203ENST00000526117 MRPS6P82932 125 aaKnown RBP19.33■□□□□ 0.68
LMX1B-203ENST00000526117 BECN1Q14457 450 aa19.33■□□□□ 0.68
LMX1B-203ENST00000526117 C9orf50Q5SZB4 431 aa19.33■□□□□ 0.68
LMX1B-203ENST00000526117 HAUS3Q68CZ6 603 aa19.33■□□□□ 0.68
LMX1B-203ENST00000526117 DTHD1Q6ZMT9 781 aa19.33■□□□□ 0.68
LMX1B-203ENST00000526117 FERMT3Q86UX7 667 aa19.33■□□□□ 0.68
LMX1B-203ENST00000526117 KIAA0319LQ8IZA0 1049 aa19.33■□□□□ 0.68
LMX1B-203ENST00000526117 DNAJB3Q8WWF6 145 aa19.33■□□□□ 0.68
LMX1B-203ENST00000526117 MTIF3Q9H2K0 278 aaKnown RBP19.33■□□□□ 0.68
LMX1B-203ENST00000526117 ANKEF1Q9NU02 776 aa19.33■□□□□ 0.68
LMX1B-203ENST00000526117 SEPT9Q9UHD8 586 aaPredicted RBP19.33■□□□□ 0.68
LMX1B-203ENST00000526117 SIP14410 1827 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 SCN5AQ14524 2016 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 GAS2O43903 313 aaKnown RBP19.32■□□□□ 0.68
LMX1B-203ENST00000526117 MAFO75444 373 aaPredicted RBP19.32■□□□□ 0.68
LMX1B-203ENST00000526117 CHRNA1P02708 482 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 SPATA31C1P0DKV0 1188 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 ACTN1P12814 892 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 TMOD1P28289 359 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 TBC1D8BQ0IIM8 1120 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 PLEKHG4Q58EX7 1191 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 CNKSR3Q6P9H4 555 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 ZNF365Q70YC5 407 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 KCTD17Q8N5Z5 321 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 USP38Q8NB14 1042 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 CYP26B1Q9NR63 512 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 LAMA3Q16787 3333 aa19.32■□□□□ 0.68
LMX1B-203ENST00000526117 ARID2Q68CP9 1835 aa19.31■□□□□ 0.68
LMX1B-203ENST00000526117 DDX11L8A8MPP1 907 aa19.31■□□□□ 0.68
LMX1B-203ENST00000526117 SLC26A4O43511 780 aa19.31■□□□□ 0.68
LMX1B-203ENST00000526117 EFCAB14O75071 495 aa19.31■□□□□ 0.68
LMX1B-203ENST00000526117 ACRP10323 421 aa19.31■□□□□ 0.68
LMX1B-203ENST00000526117 RFC5P40937 340 aa19.31■□□□□ 0.68
LMX1B-203ENST00000526117 CDC42EP1Q00587 391 aa19.31■□□□□ 0.68
LMX1B-203ENST00000526117 CYP4A11Q02928 519 aa19.31■□□□□ 0.68
LMX1B-203ENST00000526117 CTTNQ14247 550 aaKnown RBP19.31■□□□□ 0.68
LMX1B-203ENST00000526117 IL17AQ16552 155 aa19.31■□□□□ 0.68
LMX1B-203ENST00000526117 APBB2Q92870 758 aa19.31■□□□□ 0.68
LMX1B-203ENST00000526117 RNPC3Q96LT9 517 aaKnown RBP19.31■□□□□ 0.68
LMX1B-203ENST00000526117 DHX33Q9H6R0 707 aaKnown RBP19.31■□□□□ 0.68
LMX1B-203ENST00000526117 LRWD1Q9UFC0 647 aa19.31■□□□□ 0.68
LMX1B-203ENST00000526117 TRPV2Q9Y5S1 764 aa19.31■□□□□ 0.68
LMX1B-203ENST00000526117 M0QZ92 97 aa19.3■□□□□ 0.68
LMX1B-203ENST00000526117 MKRN4PQ13434 485 aaPredicted RBP19.3■□□□□ 0.68
LMX1B-203ENST00000526117 MTERF2Q49AM1 385 aa19.3■□□□□ 0.68
LMX1B-203ENST00000526117 EFCAB12Q6NXP0 572 aa19.3■□□□□ 0.68
LMX1B-203ENST00000526117 DEFB128Q7Z7B8 93 aa19.3■□□□□ 0.68
LMX1B-203ENST00000526117 CATSPER3Q86XQ3 398 aa19.3■□□□□ 0.68
LMX1B-203ENST00000526117 TPH2Q8IWU9 490 aa19.3■□□□□ 0.68
LMX1B-203ENST00000526117 ZBTB10Q96DT7 871 aa19.3■□□□□ 0.68
LMX1B-203ENST00000526117 AK8Q96MA6 479 aa19.3■□□□□ 0.68
LMX1B-203ENST00000526117 CELF4Q9BZC1 486 aaKnown RBP19.3■□□□□ 0.68
LMX1B-203ENST00000526117 DBR1Q9UK59 544 aaKnown RBP19.3■□□□□ 0.68
LMX1B-203ENST00000526117 CDY2AQ9Y6F7 541 aa19.3■□□□□ 0.68
LMX1B-203ENST00000526117 ABHD14A-ACY1A0A1B0GW23 586 aa19.29■□□□□ 0.68
LMX1B-203ENST00000526117 MED24O75448 989 aa19.29■□□□□ 0.68
LMX1B-203ENST00000526117 CTSHP09668 335 aa19.29■□□□□ 0.68
LMX1B-203ENST00000526117 ZSCAN22P10073 491 aaPredicted RBP19.29■□□□□ 0.68
LMX1B-203ENST00000526117 SF3A1Q15459 793 aaKnown RBP19.29■□□□□ 0.68
LMX1B-203ENST00000526117 FBXO47Q5MNV8 452 aa19.29■□□□□ 0.68
LMX1B-203ENST00000526117 TSHZ1Q6ZSZ6 1077 aa19.29■□□□□ 0.68
LMX1B-203ENST00000526117 SLC7A3Q8WY07 619 aa19.29■□□□□ 0.68
LMX1B-203ENST00000526117 CEP170P1Q96L14 293 aa19.29■□□□□ 0.68
LMX1B-203ENST00000526117 NACC1Q96RE7 527 aa19.29■□□□□ 0.68
LMX1B-203ENST00000526117 MAP7D2Q96T17 732 aa19.29■□□□□ 0.68
LMX1B-203ENST00000526117 FAM49AQ9H0Q0 323 aaPredicted RBP19.29■□□□□ 0.68
LMX1B-203ENST00000526117 MYH15Q9Y2K3 1946 aa19.29■□□□□ 0.68
LMX1B-203ENST00000526117 TMEM150BA6NC51 233 aa19.28■□□□□ 0.68
LMX1B-203ENST00000526117 GPR32O75388 356 aa19.28■□□□□ 0.68
LMX1B-203ENST00000526117 RARRES1P49788 294 aa19.28■□□□□ 0.68
LMX1B-203ENST00000526117 DNM2P50570 870 aa19.28■□□□□ 0.68
LMX1B-203ENST00000526117 SMAD3P84022 425 aaKnown RBP19.28■□□□□ 0.68
LMX1B-203ENST00000526117 PTPAQ15257 358 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms