RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 CEP89Q96ST8 783 aa13.84□□□□□ -0.19
CCS-202ENST00000525435 CYP26B1Q9NR63 512 aa13.84□□□□□ -0.19
CCS-202ENST00000525435 WRAP73Q9P2S5 460 aaPredicted RBP13.84□□□□□ -0.19
CCS-202ENST00000525435 TFIP11Q9UBB9 837 aaKnown RBP13.84□□□□□ -0.19
CCS-202ENST00000525435 DBR1Q9UK59 544 aaKnown RBP13.84□□□□□ -0.19
CCS-202ENST00000525435 ZMYND8Q9ULU4 1186 aaPredicted RBP13.84□□□□□ -0.19
CCS-202ENST00000525435 DOCK5Q9H7D0 1870 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 IGKV6-21A0A0C4DH24 114 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 SPTLC2O15270 562 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 GAS2O43903 313 aaKnown RBP13.83□□□□□ -0.2
CCS-202ENST00000525435 MAFO75444 373 aaPredicted RBP13.83□□□□□ -0.2
CCS-202ENST00000525435 MED24O75448 989 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 C22orf31O95567 290 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 IQCF3P0C7M6 154 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 CKBP12277 381 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 SYN1P17600 705 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 ITGB8P26012 769 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 CYP2C18P33260 490 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 BMP8BP34820 402 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 THPOP40225 353 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 CCT6AP40227 531 aaKnown RBP13.83□□□□□ -0.2
CCS-202ENST00000525435 RFC5P40937 340 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 UBA7P41226 1012 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 DNM2P50570 870 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 STK38Q15208 465 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 FAM26DQ5JW98 314 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 FOXD4L5Q5VV16 416 aaPredicted RBP13.83□□□□□ -0.2
CCS-202ENST00000525435 IER5Q5VY09 327 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 RPUSD2Q8IZ73 545 aaKnown RBP13.83□□□□□ -0.2
CCS-202ENST00000525435 KIAA0319LQ8IZA0 1049 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 KRI1Q8N9T8 703 aaKnown RBP13.83□□□□□ -0.2
CCS-202ENST00000525435 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
CCS-202ENST00000525435 KCNG4Q8TDN1 519 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 FOXD4L4Q8WXT5 416 aaPredicted RBP13.83□□□□□ -0.2
CCS-202ENST00000525435 DHX38Q92620 1227 aaKnown RBP13.83□□□□□ -0.2
CCS-202ENST00000525435 CEP170P1Q96L14 293 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 CCSER1Q9C0I3 900 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 NT5C3AQ9H0P0 336 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 SEPT9Q9UHD8 586 aaPredicted RBP13.83□□□□□ -0.2
CCS-202ENST00000525435 FBXO2Q9UK22 296 aaPredicted RBP13.83□□□□□ -0.2
CCS-202ENST00000525435 RCOR1Q9UKL0 485 aa13.83□□□□□ -0.2
CCS-202ENST00000525435 RBM19Q9Y4C8 960 aaKnown RBP13.83□□□□□ -0.2
CCS-202ENST00000525435 RSPH10B2B2RC85 870 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 PFKMP08237 780 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 RSPH10BP0C881 870 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 CEBPZQ03701 1054 aaKnown RBP13.82□□□□□ -0.2
CCS-202ENST00000525435 FPGSQ05932 587 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 PPIGQ13427 754 aaKnown RBP eCLIP13.82□□□□□ -0.24e-8■■■□□ 18.9
CCS-202ENST00000525435 XKR9Q5GH70 373 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 TRMT1LQ7Z2T5 733 aaKnown RBP13.82□□□□□ -0.2
CCS-202ENST00000525435 LINC01465Q8N7H1 131 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 SNX29Q8TEQ0 813 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 TRAPPC12Q8WVT3 735 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 SLC7A3Q8WY07 619 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 BADQ92934 168 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 GDF15Q99988 308 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 MMTAG2Q9BU76 263 aaKnown RBP13.82□□□□□ -0.2
CCS-202ENST00000525435 PPP1R12CQ9BZL4 782 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 FTOQ9C0B1 505 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCS-202ENST00000525435 DHX33Q9H6R0 707 aaKnown RBP13.82□□□□□ -0.2
CCS-202ENST00000525435 DNM3Q9UQ16 869 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 SQORQ9Y6N5 450 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 KDM3AQ9Y4C1 1321 aa13.82□□□□□ -0.2
CCS-202ENST00000525435 DGAT1O75907 488 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 MARCKSP29966 332 aaPredicted RBP13.81□□□□□ -0.2
CCS-202ENST00000525435 MAGEA10P43363 369 aaPredicted RBP13.81□□□□□ -0.2
CCS-202ENST00000525435 RARRES1P49788 294 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 KRT85P78386 507 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 DNM1Q05193 864 aaKnown RBP13.81□□□□□ -0.2
CCS-202ENST00000525435 MTERF2Q49AM1 385 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 ZNF618Q5T7W0 954 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 EFCAB12Q6NXP0 572 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 RUFY4Q6ZNE9 571 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 LRRC8DQ7L1W4 858 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 METTL13Q8N6R0 699 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 USP38Q8NB14 1042 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 DNAJB3Q8WWF6 145 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 CALML4Q96GE6 196 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 MAP7D2Q96T17 732 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 SCAND2PQ9GZW5 306 aaPredicted RBP13.81□□□□□ -0.2
CCS-202ENST00000525435 WNT8AQ9H1J5 351 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 KIAA1024Q9UPX6 916 aa13.81□□□□□ -0.2
CCS-202ENST00000525435 M0QZ92 97 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 ASAP2O43150 1006 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 CUTAO60888 179 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 CDC25AP30304 524 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 POLGP54098 1239 aaPredicted RBP13.8□□□□□ -0.2
CCS-202ENST00000525435 CCL23P55773 120 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 NPEPPSP55786 919 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 TRAF7Q6Q0C0 670 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 POTEGQ6S5H5 508 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 CABP7Q86V35 215 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 PIGOQ8TEQ8 1089 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 TCP11Q8WWU5 503 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 WNT8BQ93098 351 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 CCDC43Q96MW1 224 aaKnown RBP13.8□□□□□ -0.2
CCS-202ENST00000525435 CSRNP2Q9H175 543 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 SUGCTQ9HAC7 445 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 IL23AQ9NPF7 189 aa13.8□□□□□ -0.2
CCS-202ENST00000525435 TSHZ2Q9NRE2 1034 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms