RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 SFNP31947 248 aa12.61□□□□□ -0.39
TRAPPC4-204ENST00000524797 ST3GAL1Q11201 340 aa12.61□□□□□ -0.39
TRAPPC4-204ENST00000524797 CCDC85BQ15834 202 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-204ENST00000524797 UGCGQ16739 394 aa12.61□□□□□ -0.39
TRAPPC4-204ENST00000524797 C8orf34Q49A92 452 aa12.61□□□□□ -0.39
TRAPPC4-204ENST00000524797 ETNPPLQ8TBG4 499 aa12.61□□□□□ -0.39
TRAPPC4-204ENST00000524797 MTCH2Q9Y6C9 303 aa12.61□□□□□ -0.39
TRAPPC4-204ENST00000524797 ENPP3O14638 875 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 ZNF862O60290 1169 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 UPP2O95045 317 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 CD52P31358 61 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 GRB10Q13322 594 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 B3GNT9Q6UX72 402 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 MIER3Q7Z3K6 550 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 KIAA0319LQ8IZA0 1049 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 RDM1Q8NG50 284 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 LINC01599Q8WXQ3 324 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 TGS1Q96RS0 853 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 PRDM6Q9NQX0 595 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 DDX25Q9UHL0 483 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 PRRC2BQ5JSZ5 2229 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 ATG2AQ2TAZ0 1938 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 DLL1O00548 723 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 GTPBP6O43824 516 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 SLC37A4O43826 429 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 JAK2O60674 1132 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 LPXNO60711 386 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 OATP04181 439 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 PRKCEQ02156 737 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 LETM2Q2VYF4 491 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 PIK3AP1Q6ZUJ8 805 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 NEK8Q86SG6 692 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 MICALL1Q8N3F8 863 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 GDPD5Q8WTR4 605 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 NRBP2Q9NSY0 501 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 CEP131Q9UPN4 1083 aa12.6□□□□□ -0.39
TRAPPC4-204ENST00000524797 FAM205CA6NFA0 338 aa12.59□□□□□ -0.39
TRAPPC4-204ENST00000524797 KRT2P35908 639 aa12.59□□□□□ -0.39
TRAPPC4-204ENST00000524797 PAK2Q13177 524 aa12.59□□□□□ -0.39
TRAPPC4-204ENST00000524797 EARS2Q5JPH6 523 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-204ENST00000524797 TRMT1LQ7Z2T5 733 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-204ENST00000524797 TNFRSF25Q93038 417 aa12.59□□□□□ -0.39
TRAPPC4-204ENST00000524797 YME1L1Q96TA2 773 aa12.59□□□□□ -0.39
TRAPPC4-204ENST00000524797 CDHR5Q9HBB8 845 aa12.59□□□□□ -0.39
TRAPPC4-204ENST00000524797 MTUS1Q9ULD2 1270 aa12.59□□□□□ -0.39
TRAPPC4-204ENST00000524797 PADI3Q9ULW8 664 aa12.59□□□□□ -0.39
TRAPPC4-204ENST00000524797 ARID2Q68CP9 1835 aa12.59□□□□□ -0.39
TRAPPC4-204ENST00000524797 MAGEB2O15479 319 aa12.58□□□□□ -0.39
TRAPPC4-204ENST00000524797 GCFC2P16383 781 aaKnown RBP12.58□□□□□ -0.39
TRAPPC4-204ENST00000524797 FOSBP53539 338 aa12.58□□□□□ -0.39
TRAPPC4-204ENST00000524797 KRT40Q6A162 431 aa12.58□□□□□ -0.39
TRAPPC4-204ENST00000524797 PPP4R3AQ6IN85 833 aa12.58□□□□□ -0.39
TRAPPC4-204ENST00000524797 RTN4RL1Q86UN2 441 aaPredicted RBP12.58□□□□□ -0.39
TRAPPC4-204ENST00000524797 LINC01465Q8N7H1 131 aa12.58□□□□□ -0.39
TRAPPC4-204ENST00000524797 NAP1L4Q99733 375 aaKnown RBP12.58□□□□□ -0.39
TRAPPC4-204ENST00000524797 C17orf80Q9BSJ5 609 aa12.58□□□□□ -0.39
TRAPPC4-204ENST00000524797 ERVK-5Q9HDB9 667 aa12.58□□□□□ -0.39
TRAPPC4-204ENST00000524797 LIMCH1Q9UPQ0 1083 aa12.58□□□□□ -0.39
TRAPPC4-204ENST00000524797 COL6A3P12111 3177 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 FNDC1Q4ZHG4 1894 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 STBD1O95210 358 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 NR5A1Q13285 461 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 METTL13Q8N6R0 699 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 FBXO22Q8NEZ5 403 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 FAM20AQ96MK3 541 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 SAMD11Q96NU1 681 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 KIF2CQ99661 725 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 FTHL17Q9BXU8 183 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 TMX1Q9H3N1 280 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 SUGCTQ9HAC7 445 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 RC3H2Q9HBD1 1191 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 BRMS1Q9HCU9 246 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 KCNMB3Q9NPA1 279 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 VAV3Q9UKW4 847 aa12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 NOC2LQ9Y3T9 749 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-204ENST00000524797 CLCN3P51790 818 aa12.57□□□□□ -0.4
TRAPPC4-204ENST00000524797 TMEM266Q2M3C6 531 aa12.57□□□□□ -0.4
TRAPPC4-204ENST00000524797 TMEM40Q8WWA1 233 aa12.57□□□□□ -0.4
TRAPPC4-204ENST00000524797 PPP1R16BQ96T49 567 aa12.57□□□□□ -0.4
TRAPPC4-204ENST00000524797 LMCD1Q9NZU5 365 aa12.57□□□□□ -0.4
TRAPPC4-204ENST00000524797 THEGQ9P2T0 379 aa12.57□□□□□ -0.4
TRAPPC4-204ENST00000524797 EML1O00423 815 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 TBX3O15119 743 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 CCNT1O60563 726 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 GPR32O75388 356 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 RPS6KA5O75582 802 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 MMP1P03956 469 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 VTNP04004 478 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 CRYBB1P53674 252 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 PPP2R5CQ13362 524 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 TARBP2Q15633 366 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 EFCAB12Q6NXP0 572 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 CCDC83Q8IWF9 413 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 LRRC71Q8N4P6 559 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 HAS1Q92839 578 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 OSMRQ99650 979 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 NIFKQ9BYG3 293 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 TSPYL2Q9H2G4 693 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 SEPT9Q9UHD8 586 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms