RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 CEP89Q96ST8 783 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 POLR3CQ9BUI4 534 aaPredicted RBP16.94■□□□□ 0.3
SF3B2-202ENST00000524475 RAB34Q9BZG1 259 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 TUFT1Q9NNX1 390 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 SQORQ9Y6N5 450 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 MORC2Q9Y6X9 1032 aaPredicted RBP16.94■□□□□ 0.3
SF3B2-202ENST00000524475 KDM3AQ9Y4C1 1321 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 SIP14410 1827 aa16.93■□□□□ 0.3
SF3B2-202ENST00000524475 POTEMA6NI47 508 aa16.93■□□□□ 0.3
SF3B2-202ENST00000524475 MBTPS1Q14703 1052 aa16.93■□□□□ 0.3
SF3B2-202ENST00000524475 HABP4Q5JVS0 413 aaKnown RBP16.93■□□□□ 0.3
SF3B2-202ENST00000524475 ANO5Q75V66 913 aa16.93■□□□□ 0.3
SF3B2-202ENST00000524475 EXOC8Q8IYI6 725 aa16.93■□□□□ 0.3
SF3B2-202ENST00000524475 ERMNQ8TAM6 284 aa16.93■□□□□ 0.3
SF3B2-202ENST00000524475 HERVK_113Q902F9 699 aa16.93■□□□□ 0.3
SF3B2-202ENST00000524475 DYDC2Q96IM9 177 aa16.93■□□□□ 0.3
SF3B2-202ENST00000524475 JPH2Q9BR39 696 aaPredicted RBP16.93■□□□□ 0.3
SF3B2-202ENST00000524475 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.93■□□□□ 0.31e-10■□□□□ 11.3
SF3B2-202ENST00000524475 MTIF3Q9H2K0 278 aaKnown RBP16.93■□□□□ 0.3
SF3B2-202ENST00000524475 RGL1Q9NZL6 768 aa16.93■□□□□ 0.3
SF3B2-202ENST00000524475 WRAP73Q9P2S5 460 aaPredicted RBP16.93■□□□□ 0.3
SF3B2-202ENST00000524475 SEPT9Q9UHD8 586 aaPredicted RBP16.93■□□□□ 0.3
SF3B2-202ENST00000524475 ARID2Q68CP9 1835 aa16.93■□□□□ 0.3
SF3B2-202ENST00000524475 IGKV6-21A0A0C4DH24 114 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 NBNO60934 754 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 BAIAP3O94812 1187 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 XRCC6P12956 609 aaKnown RBP eCLIP16.92■□□□□ 0.3
SF3B2-202ENST00000524475 RPA1P27694 616 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 TECP42680 631 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 MRPS6P82932 125 aaKnown RBP16.92■□□□□ 0.3
SF3B2-202ENST00000524475 BECN1Q14457 450 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 SHHQ15465 462 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 C9orf50Q5SZB4 431 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 IER5Q5VY09 327 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 HAUS3Q68CZ6 603 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 OTUD6AQ7L8S5 288 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 FERMT3Q86UX7 667 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 KIAA0319LQ8IZA0 1049 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 DNAJB3Q8WWF6 145 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 ANKEF1Q9NU02 776 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 MYH15Q9Y2K3 1946 aa16.92■□□□□ 0.3
SF3B2-202ENST00000524475 FGBP02675 491 aa16.91■□□□□ 0.3
SF3B2-202ENST00000524475 SPATA31C1P0DKV0 1188 aa16.91■□□□□ 0.3
SF3B2-202ENST00000524475 ACTN1P12814 892 aa16.91■□□□□ 0.3
SF3B2-202ENST00000524475 TMOD1P28289 359 aa16.91■□□□□ 0.3
SF3B2-202ENST00000524475 YWHABP31946 246 aaKnown RBP16.91■□□□□ 0.3
SF3B2-202ENST00000524475 TBC1D8BQ0IIM8 1120 aa16.91■□□□□ 0.3
SF3B2-202ENST00000524475 CNKSR3Q6P9H4 555 aa16.91■□□□□ 0.3
SF3B2-202ENST00000524475 DTHD1Q6ZMT9 781 aa16.91■□□□□ 0.3
SF3B2-202ENST00000524475 ZNF365Q70YC5 407 aa16.91■□□□□ 0.3
SF3B2-202ENST00000524475 CYP26B1Q9NR63 512 aa16.91■□□□□ 0.3
SF3B2-202ENST00000524475 LOXHD1Q8IVV2 1947 aa16.91■□□□□ 0.3
SF3B2-202ENST00000524475 DDX11L8A8MPP1 907 aa16.9■□□□□ 0.3
SF3B2-202ENST00000524475 GAS2O43903 313 aaKnown RBP16.9■□□□□ 0.3
SF3B2-202ENST00000524475 EFCAB14O75071 495 aa16.9■□□□□ 0.3
SF3B2-202ENST00000524475 MAFO75444 373 aaPredicted RBP16.9■□□□□ 0.3
SF3B2-202ENST00000524475 CHRNA1P02708 482 aa16.9■□□□□ 0.3
SF3B2-202ENST00000524475 ACRP10323 421 aa16.9■□□□□ 0.3
SF3B2-202ENST00000524475 RFC5P40937 340 aa16.9■□□□□ 0.3
SF3B2-202ENST00000524475 CYP4A11Q02928 519 aa16.9■□□□□ 0.3
SF3B2-202ENST00000524475 CTTNQ14247 550 aaKnown RBP16.9■□□□□ 0.3
SF3B2-202ENST00000524475 PLEKHG4Q58EX7 1191 aa16.9■□□□□ 0.3
SF3B2-202ENST00000524475 KCTD17Q8N5Z5 321 aa16.9■□□□□ 0.3
SF3B2-202ENST00000524475 USP38Q8NB14 1042 aa16.9■□□□□ 0.3
SF3B2-202ENST00000524475 ZBTB10Q96DT7 871 aa16.9■□□□□ 0.3
SF3B2-202ENST00000524475 RNPC3Q96LT9 517 aaKnown RBP16.9■□□□□ 0.3
SF3B2-202ENST00000524475 DHX33Q9H6R0 707 aaKnown RBP16.9■□□□□ 0.3
SF3B2-202ENST00000524475 LRWD1Q9UFC0 647 aa16.9■□□□□ 0.3
SF3B2-202ENST00000524475 TRPV2Q9Y5S1 764 aa16.9■□□□□ 0.3
SF3B2-202ENST00000524475 M0QZ92 97 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 SLC26A4O43511 780 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 CTSHP09668 335 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 CDC42EP1Q00587 391 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 IL17AQ16552 155 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 MTERF2Q49AM1 385 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 EFCAB12Q6NXP0 572 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 DEFB128Q7Z7B8 93 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 CATSPER3Q86XQ3 398 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 TPH2Q8IWU9 490 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 APBB2Q92870 758 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 CEP170P1Q96L14 293 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 AK8Q96MA6 479 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 MAP7D2Q96T17 732 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 CELF4Q9BZC1 486 aaKnown RBP16.89■□□□□ 0.29
SF3B2-202ENST00000524475 FAM49AQ9H0Q0 323 aaPredicted RBP16.89■□□□□ 0.29
SF3B2-202ENST00000524475 CDY2AQ9Y6F7 541 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 SZT2Q5T011 3432 aa16.89■□□□□ 0.29
SF3B2-202ENST00000524475 MICAL3Q7RTP6 2002 aa16.88■□□□□ 0.29
SF3B2-202ENST00000524475 ABHD14A-ACY1A0A1B0GW23 586 aa16.88■□□□□ 0.29
SF3B2-202ENST00000524475 TMEM150BA6NC51 233 aa16.88■□□□□ 0.29
SF3B2-202ENST00000524475 MED24O75448 989 aa16.88■□□□□ 0.29
SF3B2-202ENST00000524475 ZSCAN22P10073 491 aaPredicted RBP16.88■□□□□ 0.29
SF3B2-202ENST00000524475 MKRN4PQ13434 485 aaPredicted RBP16.88■□□□□ 0.29
SF3B2-202ENST00000524475 SF3A1Q15459 793 aaKnown RBP16.88■□□□□ 0.29
SF3B2-202ENST00000524475 FBXO47Q5MNV8 452 aa16.88■□□□□ 0.29
SF3B2-202ENST00000524475 PLA2G4FQ68DD2 849 aa16.88■□□□□ 0.29
SF3B2-202ENST00000524475 TRMT1LQ7Z2T5 733 aaKnown RBP16.88■□□□□ 0.29
SF3B2-202ENST00000524475 METTL13Q8N6R0 699 aa16.88■□□□□ 0.29
SF3B2-202ENST00000524475 SLC7A3Q8WY07 619 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms