RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 GNA11P29992 359 aa21.32■■□□□ 1
PTP4A3-206ENST00000524028 PDIA3P30101 505 aaKnown RBP21.32■■□□□ 1
PTP4A3-206ENST00000524028 CIITAP33076 1130 aa21.32■■□□□ 1
PTP4A3-206ENST00000524028 LTBRP36941 435 aa21.32■■□□□ 1
PTP4A3-206ENST00000524028 GATMP50440 423 aa21.32■■□□□ 1
PTP4A3-206ENST00000524028 EVCP57679 992 aa21.32■■□□□ 1
PTP4A3-206ENST00000524028 CCT2P78371 535 aaKnown RBP21.32■■□□□ 1
PTP4A3-206ENST00000524028 SETQ01105 290 aaPredicted RBP21.32■■□□□ 1
PTP4A3-206ENST00000524028 NFX1Q12986 1120 aaKnown RBP21.32■■□□□ 1
PTP4A3-206ENST00000524028 ZNF746Q6NUN9 644 aaPredicted RBP21.32■■□□□ 1
PTP4A3-206ENST00000524028 EP400NLQ6ZTU2 488 aa21.32■■□□□ 1
PTP4A3-206ENST00000524028 CMTR2Q8IYT2 770 aaKnown RBP21.32■■□□□ 1
PTP4A3-206ENST00000524028 LENG9Q96B70 501 aa21.32■■□□□ 1
PTP4A3-206ENST00000524028 PLVAPQ9BX97 442 aa21.32■■□□□ 1
PTP4A3-206ENST00000524028 SLC26A6Q9BXS9 759 aa21.32■■□□□ 1
PTP4A3-206ENST00000524028 RNF26Q9BY78 433 aaPredicted RBP21.32■■□□□ 1
PTP4A3-206ENST00000524028 NCOA5Q9HCD5 579 aaKnown RBP21.32■■□□□ 1
PTP4A3-206ENST00000524028 PLAGL2Q9UPG8 496 aa21.32■■□□□ 1
PTP4A3-206ENST00000524028 RALGAPA2Q2PPJ7 1873 aa21.32■■□□□ 1
PTP4A3-206ENST00000524028 CSPG5O95196 566 aa21.31■■□□□ 1
PTP4A3-206ENST00000524028 IFNAR1P17181 557 aa21.31■■□□□ 1
PTP4A3-206ENST00000524028 DNAJB1P25685 340 aa21.31■■□□□ 1
PTP4A3-206ENST00000524028 HYAL1Q12794 435 aa21.31■■□□□ 1
PTP4A3-206ENST00000524028 PAN2Q504Q3 1202 aaKnown RBP21.31■■□□□ 1
PTP4A3-206ENST00000524028 TRMT1LQ7Z2T5 733 aaKnown RBP21.31■■□□□ 1
PTP4A3-206ENST00000524028 CKAP2LQ8IYA6 745 aa21.31■■□□□ 1
PTP4A3-206ENST00000524028 CCDC136Q96JN2 1154 aa21.31■■□□□ 1
PTP4A3-206ENST00000524028 PPP1R16BQ96T49 567 aa21.31■■□□□ 1
PTP4A3-206ENST00000524028 LRFN3Q9BTN0 628 aa21.31■■□□□ 1
PTP4A3-206ENST00000524028 CLDND1Q9NY35 253 aa21.31■■□□□ 1
PTP4A3-206ENST00000524028 VPS54Q9P1Q0 977 aa21.31■■□□□ 1
PTP4A3-206ENST00000524028 MMP1P03956 469 aa21.3■■□□□ 1
PTP4A3-206ENST00000524028 STAG3L1P0CL83 205 aa21.3■■□□□ 1
PTP4A3-206ENST00000524028 PSMA5P28066 241 aa21.3■■□□□ 1
PTP4A3-206ENST00000524028 GTF2F1P35269 517 aaKnown RBP eCLIP21.3■■□□□ 19e-7■■■□□ 15.2
PTP4A3-206ENST00000524028 AKAP17AQ02040 695 aaKnown RBP21.3■■□□□ 1
PTP4A3-206ENST00000524028 TOB2Q14106 344 aaPredicted RBP21.3■■□□□ 1
PTP4A3-206ENST00000524028 CTC1Q2NKJ3 1217 aa21.3■■□□□ 1
PTP4A3-206ENST00000524028 PUS10Q3MIT2 529 aaKnown RBP21.3■■□□□ 1
PTP4A3-206ENST00000524028 SMAP1Q8IYB5 467 aaPredicted RBP21.3■■□□□ 1
PTP4A3-206ENST00000524028 GJD3Q8N144 294 aa21.3■■□□□ 1
PTP4A3-206ENST00000524028 BBXQ8WY36 941 aaPredicted RBP21.3■■□□□ 1
PTP4A3-206ENST00000524028 C11orf16Q9NQ32 467 aa21.3■■□□□ 1
PTP4A3-206ENST00000524028 GABBR1Q9UBS5 961 aa21.3■■□□□ 1
PTP4A3-206ENST00000524028 ST3GAL5Q9UNP4 418 aa21.3■■□□□ 1
PTP4A3-206ENST00000524028 PCDHA10Q9Y5I2 948 aa21.3■■□□□ 1
PTP4A3-206ENST00000524028 PI4K2BG5E9Z4 385 aa21.29■■□□□ 1
PTP4A3-206ENST00000524028 RPS6KA5O75582 802 aa21.29■■□□□ 1
PTP4A3-206ENST00000524028 REC8O95072 547 aa21.29■■□□□ 1
PTP4A3-206ENST00000524028 ITGB1P05556 798 aa21.29■■□□□ 1
PTP4A3-206ENST00000524028 PSAPP07602 524 aa21.29■■□□□ 1
PTP4A3-206ENST00000524028 IBSPP21815 317 aaPredicted RBP21.29■■□□□ 1
PTP4A3-206ENST00000524028 SARSP49591 514 aaKnown RBP21.29■■□□□ 1
PTP4A3-206ENST00000524028 DLX2Q07687 328 aaPredicted RBP21.29■■□□□ 1
PTP4A3-206ENST00000524028 KIZQ2M2Z5 673 aa21.29■■□□□ 1
PTP4A3-206ENST00000524028 BICD2Q8TD16 824 aa21.29■■□□□ 1
PTP4A3-206ENST00000524028 P2RX5Q93086 422 aa21.29■■□□□ 1
PTP4A3-206ENST00000524028 MYO7AQ13402 2215 aa21.29■■□□□ 1
PTP4A3-206ENST00000524028 MSH4O15457 936 aa21.28■■□□□ 1
PTP4A3-206ENST00000524028 GPR32O75388 356 aa21.28■■□□□ 1
PTP4A3-206ENST00000524028 VTNP04004 478 aa21.28■■□□□ 1
PTP4A3-206ENST00000524028 RUFY3Q7L099 469 aa21.28■■□□□ 1
PTP4A3-206ENST00000524028 KLHL23Q8NBE8 558 aa21.28■■□□□ 1
PTP4A3-206ENST00000524028 CCDC148Q8NFR7 591 aa21.28■■□□□ 1
PTP4A3-206ENST00000524028 SPPL3Q8TCT6 385 aa21.28■■□□□ 1
PTP4A3-206ENST00000524028 OSMRQ99650 979 aa21.28■■□□□ 1
PTP4A3-206ENST00000524028 ADAM2Q99965 735 aa21.28■■□□□ 1
PTP4A3-206ENST00000524028 ZSWIM6Q9HCJ5 1215 aa21.28■■□□□ 1
PTP4A3-206ENST00000524028 RGS18Q9NS28 235 aa21.28■■□□□ 1
PTP4A3-206ENST00000524028 LRFN2Q9ULH4 789 aa21.28■■□□□ 1
PTP4A3-206ENST00000524028 FAM86C2PA6NEL3 165 aa21.27■■□□□ 1
PTP4A3-206ENST00000524028 LINC01565O15544 149 aa21.27■■□□□ 1
PTP4A3-206ENST00000524028 NCK2O43639 380 aa21.27■■□□□ 1
PTP4A3-206ENST00000524028 CRYBB1P53674 252 aaPredicted RBP21.27■■□□□ 1
PTP4A3-206ENST00000524028 NAALADL2Q58DX5 795 aa21.27■■□□□ 1
PTP4A3-206ENST00000524028 FAM228AQ86W67 206 aa21.27■■□□□ 1
PTP4A3-206ENST00000524028 METTL13Q8N6R0 699 aa21.27■■□□□ 1
PTP4A3-206ENST00000524028 GJA10Q969M2 543 aa21.27■■□□□ 1
PTP4A3-206ENST00000524028 LARP6Q9BRS8 491 aaKnown RBP21.27■■□□□ 1
PTP4A3-206ENST00000524028 IGFLR1Q9H665 355 aa21.27■■□□□ 1
PTP4A3-206ENST00000524028 SAMM50Q9Y512 469 aa21.27■■□□□ 1
PTP4A3-206ENST00000524028 PCDHB7Q9Y5E2 793 aa21.27■■□□□ 1
PTP4A3-206ENST00000524028 ATG2AQ2TAZ0 1938 aa21.27■■□□□ 1
PTP4A3-206ENST00000524028 C9IYK1 514 aa21.26■□□□□ 0.99
PTP4A3-206ENST00000524028 GPR182O15218 404 aa21.26■□□□□ 0.99
PTP4A3-206ENST00000524028 ZNF862O60290 1169 aa21.26■□□□□ 0.99
PTP4A3-206ENST00000524028 GPR37L1O60883 481 aa21.26■□□□□ 0.99
PTP4A3-206ENST00000524028 SSTR3P32745 418 aaPredicted RBP21.26■□□□□ 0.99
PTP4A3-206ENST00000524028 IRS1P35568 1242 aa21.26■□□□□ 0.99
PTP4A3-206ENST00000524028 CLCN3P51790 818 aa21.26■□□□□ 0.99
PTP4A3-206ENST00000524028 TMEM31Q5JXX7 168 aa21.26■□□□□ 0.99
PTP4A3-206ENST00000524028 FAM102BQ5T8I3 360 aa21.26■□□□□ 0.99
PTP4A3-206ENST00000524028 SLC24A5Q71RS6 500 aa21.26■□□□□ 0.99
PTP4A3-206ENST00000524028 LINC01465Q8N7H1 131 aa21.26■□□□□ 0.99
PTP4A3-206ENST00000524028 SH3GLB2Q9NR46 395 aa21.26■□□□□ 0.99
PTP4A3-206ENST00000524028 DENND3A2RUS2 1198 aa21.25■□□□□ 0.99
PTP4A3-206ENST00000524028 WDR64B1ANS9 1081 aa21.25■□□□□ 0.99
PTP4A3-206ENST00000524028 USP11P51784 963 aa21.25■□□□□ 0.99
PTP4A3-206ENST00000524028 NLRP5P59047 1200 aa21.25■□□□□ 0.99
PTP4A3-206ENST00000524028 CLUL1Q15846 466 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms