RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 RAXQ9Y2V3 346 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 SLC45A1Q9Y2W3 748 aa6.43□□□□□ -1.38
CTNNA1-239ENST00000523685 SZT2Q5T011 3432 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 GPR75-ASB3A0A0A6YYF3 556 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 DYNC1LI2O43237 492 aaPredicted RBP6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 PEX10O60683 326 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 LRIG2O94898 1065 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 CST3P01034 146 aaPredicted RBP6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 HMGCRP04035 888 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 LDHCP07864 332 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 CYP2B6P20813 491 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 RHBDL3P58872 404 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 IRX3P78415 501 aaPredicted RBP6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 GSTO1P78417 241 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 PABPC4Q13310 644 aaKnown RBP eCLIP6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 RRP1BQ14684 758 aaKnown RBP6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 FAM110CQ1W6H9 321 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 ARSHQ5FYA8 562 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 CDCP2Q5VXM1 449 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 OVOS1Q6IE37 1185 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 SEZ6L2Q6UXD5 910 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 LSRQ86X29 649 aaPredicted RBP6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 TEX11Q8IYF3 940 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 SLFN12Q8IYM2 578 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 SPATA5Q8NB90 893 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 NOL10Q9BSC4 688 aaKnown RBP6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 API5Q9BZZ5 524 aaKnown RBP6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 ASCC2Q9H1I8 757 aaPredicted RBP6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 PRO3102Q9H379 93 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 CNNM2Q9H8M5 875 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 PAK6Q9NQU5 681 aaPredicted RBP6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 TPSG1Q9NRR2 321 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 HMG20BQ9P0W2 317 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 LRP2BPQ9P2M1 347 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 STOML1Q9UBI4 398 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 HDAC5Q9UQL6 1122 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 RFX7Q2KHR2 1363 aa6.42□□□□□ -1.38
CTNNA1-239ENST00000523685 NME1P15531 152 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 GCLCP48506 637 aaPredicted RBP6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 RBL2Q08999 1139 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 PRAMEF13Q5VWM6 474 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 RUFY4Q6ZNE9 571 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 ARMCX6Q7L4S7 300 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 NLRC3Q7RTR2 1065 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 CCAR1Q8IX12 1150 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 MFSD2AQ8NA29 543 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 SH3RF3Q8TEJ3 882 aaPredicted RBP6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 ZNF384Q8TF68 577 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 NSUN4Q96CB9 384 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 TM9SF2Q99805 663 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 PAGR1Q9BTK6 254 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 OSBPL5Q9H0X9 879 aaPredicted RBP6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 C11orf49Q9H6J7 331 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 AS3MTQ9HBK9 375 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 CWC22Q9HCG8 908 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 TMOD4Q9NZQ9 345 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 PRKAG3Q9UGI9 489 aa6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 RANBP2P49792 3224 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-239ENST00000523685 MYH13Q9UKX3 1938 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 A0A1W2PPC1 479 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 HMX2A2RU54 273 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 SMAD7O15105 426 aaKnown RBP6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 GNAI3P08754 354 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 RAG1P15918 1043 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 G3BP1Q13283 466 aaKnown RBP eCLIP6.4□□□□□ -1.388e-8■■■□□ 18.1
CTNNA1-239ENST00000523685 SHROOM1Q2M3G4 852 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 TNNI3KQ59H18 835 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 PRR23CQ6ZRP0 262 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 Q7L0L9 218 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 MAPKAPK5Q8IW41 473 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 CRACR2BQ8N4Y2 399 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 DEFB123Q8N688 67 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 FAM169BQ8N8A8 192 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 GIMAP7Q8NHV1 300 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 TGFBRAP1Q8WUH2 860 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 TRIB2Q92519 343 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 CCDC74BQ96LY2 380 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 PSMG3-AS1Q96PY0 264 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 P2RX7Q99572 595 aaKnown RBP6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 DPH2Q9BQC3 489 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 C7orf69Q9H7B7 122 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 C1GALT1Q9NS00 363 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 AATFQ9NY61 560 aaKnown RBP eCLIP6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 SAP30BPQ9UHR5 308 aaKnown RBP6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 GJD2Q9UKL4 321 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 DOCK2Q92608 1830 aa6.4□□□□□ -1.38
CTNNA1-239ENST00000523685 PDS5AQ29RF7 1337 aaKnown RBP6.4□□□□□ -1.39
CTNNA1-239ENST00000523685 RPTORQ8N122 1335 aa6.4□□□□□ -1.39
CTNNA1-239ENST00000523685 MYH2Q9UKX2 1941 aa6.39□□□□□ -1.39
CTNNA1-239ENST00000523685 TNFRSF10CO14798 259 aa6.39□□□□□ -1.39
CTNNA1-239ENST00000523685 RGS13O14921 159 aa6.39□□□□□ -1.39
CTNNA1-239ENST00000523685 IGSF3O75054 1194 aa6.39□□□□□ -1.39
CTNNA1-239ENST00000523685 BAG3O95817 575 aa6.39□□□□□ -1.39
CTNNA1-239ENST00000523685 UQCRFS1P1P0C7P4 283 aa6.39□□□□□ -1.39
CTNNA1-239ENST00000523685 ZKSCAN1P17029 563 aaPredicted RBP6.39□□□□□ -1.39
CTNNA1-239ENST00000523685 GUCY2CP25092 1073 aa6.39□□□□□ -1.39
CTNNA1-239ENST00000523685 MCAMP43121 646 aa6.39□□□□□ -1.39
CTNNA1-239ENST00000523685 MAGEA10P43363 369 aaPredicted RBP6.39□□□□□ -1.39
CTNNA1-239ENST00000523685 BACE1P56817 501 aa6.39□□□□□ -1.39
CTNNA1-239ENST00000523685 HERVK_113P62684 666 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms