RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 PABPC4Q13310 644 aaKnown RBP eCLIP9.77□□□□□ -0.84
CSMD1-212ENST00000523387 KIAA1755Q5JYT7 1200 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 TRMT1LQ7Z2T5 733 aaKnown RBP9.77□□□□□ -0.84
CSMD1-212ENST00000523387 CADPS2Q86UW7 1296 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 VGLL2Q8N8G2 317 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 TMEM47Q9BQJ4 181 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 TXLNGQ9NUQ3 528 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 TMOD4Q9NZQ9 345 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 CNOT8Q9UFF9 292 aaKnown RBP9.77□□□□□ -0.84
CSMD1-212ENST00000523387 TCEAL9Q9UHQ7 104 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 RIC1Q4ADV7 1423 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 E9PMD0 336 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 LRRN2O75325 713 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 KRT15P19012 456 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 CETN2P41208 172 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 RASSF2P50749 326 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 POLE2P56282 527 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 XRCC4Q13426 336 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 ZNF365Q70YC5 407 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 GLYCTKQ8IVS8 523 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 ACTRT1Q8TDG2 376 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 DDX23Q9BUQ8 820 aaKnown RBP9.77□□□□□ -0.85
CSMD1-212ENST00000523387 TRIM4Q9C037 500 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 PCDHGC5Q9Y5F6 944 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 DCDC2CA8MYV0 355 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 STXBP3O00186 592 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 UCHL3P15374 230 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 BRD2P25440 801 aaKnown RBP9.77□□□□□ -0.85
CSMD1-212ENST00000523387 RAD23BP54727 409 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 PICALMQ13492 652 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 ZNF572Q7Z3I7 529 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-212ENST00000523387 SPATA21Q7Z572 469 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 TPCN2Q8NHX9 752 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 MCUR1Q96AQ8 359 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 NAGPAQ9UK23 515 aa9.77□□□□□ -0.85
CSMD1-212ENST00000523387 FAM187AA6NFU0 413 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 FLT3P36888 993 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 CYP2J2P51589 502 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 GALCP54803 685 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 SNX1Q13596 522 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 ITIH4Q14624 930 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 UBE2SQ16763 222 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 HHATQ5VTY9 493 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 AGAP11Q8TF27 550 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 SHISA4Q96DD7 197 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 ACSBG1Q96GR2 724 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 ERP44Q9BS26 406 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 PITPNM3Q9BZ71 974 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 PABPC3Q9H361 631 aaKnown RBP9.76□□□□□ -0.85
CSMD1-212ENST00000523387 ATRNO75882 1429 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 RASSF10A6NK89 507 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 PLCG2P16885 1265 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 IL9RQ01113 521 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 LRRC47Q8N1G4 583 aaKnown RBP9.76□□□□□ -0.85
CSMD1-212ENST00000523387 PRCCQ92733 491 aaPredicted RBP9.76□□□□□ -0.85
CSMD1-212ENST00000523387 NLRP3Q96P20 1036 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 ABCF3Q9NUQ8 709 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 ARL2BPQ9Y2Y0 163 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 ABCB11O95342 1321 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 MYH10P35580 1976 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 MEIS1O00470 390 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 ADAMTS2O95450 1211 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 GAS8O95995 478 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 BRAFP15056 766 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 CYP4A11Q02928 519 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 GRB10Q13322 594 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 ARHGEF18Q6ZSZ5 1173 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 JAMLQ86YT9 394 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 VPS52Q8N1B4 723 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 CCDC24Q8N4L8 307 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 MYCT1Q8N699 235 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 FBXO25Q8TCJ0 367 aa9.76□□□□□ -0.85
CSMD1-212ENST00000523387 EPS8L3Q8TE67 593 aaKnown RBP9.76□□□□□ -0.85
CSMD1-212ENST00000523387 TGS1Q96RS0 853 aaKnown RBP9.76□□□□□ -0.85
CSMD1-212ENST00000523387 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.76□□□□□ -0.85
CSMD1-212ENST00000523387 HSPA6P17066 643 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 ADCY8P40145 1251 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 COPS2P61201 443 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 IFI35P80217 286 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 TRIP13Q15645 432 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 NPY5RQ15761 445 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 ERMARDQ5T6L9 678 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 WLSQ5T9L3 541 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 C6orf163Q5TEZ5 329 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 FYB2Q5VWT5 728 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 CAPN12Q6ZSI9 719 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 MAEAQ7L5Y9 396 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 SRRM1Q8IYB3 904 aaKnown RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 MARCH10Q8NA82 808 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 CCT6BQ92526 530 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 GBP5Q96PP8 586 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 RIOK1Q9BRS2 568 aaKnown RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 NPHP3-ACAD11A0A0J9YXS1 232 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 PODXLO00592 558 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 ECEL1O95672 775 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 IL6STP40189 918 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 ALDH5A1P51649 535 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 KCNJ2P63252 427 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 MKRN4PQ13434 485 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 LONRF1Q17RB8 773 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms