RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 KRT40Q6A162 431 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 SCARA3Q6AZY7 606 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 MFSD5Q6N075 450 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 ZNF365Q70YC5 407 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 SPATA5Q8NB90 893 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 TMEM87AQ8NBN3 555 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 SMG8Q8ND04 991 aaKnown RBP7.74□□□□□ -1.17
VPS13B-211ENST00000522802 GRIN3AQ8TCU5 1115 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 TGFBRAP1Q8WUH2 860 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 SSBP4Q9BWG4 385 aaPredicted RBP7.74□□□□□ -1.17
VPS13B-211ENST00000522802 KIAA1683Q9H0B3 1180 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 DHX36Q9H2U1 1008 aaKnown RBP7.74□□□□□ -1.17
VPS13B-211ENST00000522802 KRT82Q9NSB4 513 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 MCM3APO60318 1980 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 C5orf42Q9H799 3197 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 DCDC2CA8MYV0 355 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 ERC2O15083 957 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 RLBP1P12271 317 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 IL15P40933 162 aaPredicted RBP7.73□□□□□ -1.17
VPS13B-211ENST00000522802 RPS26P62854 115 aaKnown RBP7.73□□□□□ -1.17
VPS13B-211ENST00000522802 PPIGQ13427 754 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS13B-211ENST00000522802 RAB3GAP1Q15042 981 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 ANKRD34AQ69YU3 496 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 TTBK2Q6IQ55 1244 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 PSRC1Q6PGN9 363 aaPredicted RBP7.73□□□□□ -1.17
VPS13B-211ENST00000522802 RNF180Q86T96 592 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 WDR63Q8IWG1 891 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 WDR89Q96FK6 387 aaPredicted RBP7.73□□□□□ -1.17
VPS13B-211ENST00000522802 MEGF10Q96KG7 1140 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 UBL7Q96S82 380 aaPredicted RBP7.73□□□□□ -1.17
VPS13B-211ENST00000522802 SPATC1LQ9H0A9 340 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 SLC28A3Q9HAS3 691 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 CD320Q9NPF0 282 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 STARD7Q9NQZ5 370 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 GINM1Q9NU53 330 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 MSRAQ9UJ68 235 aa7.73□□□□□ -1.17
VPS13B-211ENST00000522802 EPOPA6NHQ4 379 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 RFXAPO00287 272 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 ZNF862O60290 1169 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 TIAF1O95411 115 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 PGK2P07205 417 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 LDHCP07864 332 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 MCAMP43121 646 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 TFCP2Q12800 502 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 MVPQ14764 893 aaKnown RBP7.72□□□□□ -1.17
VPS13B-211ENST00000522802 LRRC14Q15048 493 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 AAK1Q2M2I8 961 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 TSNAXIP1Q2TAA8 658 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 KIAA1755Q5JYT7 1200 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 AGMOQ6ZNB7 445 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 SHCBP1Q8NEM2 672 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 HERVK_113Q902F9 699 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 KCNB2Q92953 911 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 TOX2Q96NM4 488 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 RSRP1Q9BUV0 290 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 CEP41Q9BYV8 373 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 TANGO6Q9C0B7 1094 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 CBX8Q9HC52 389 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 CYP4F12Q9HCS2 524 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 PTPRCP08575 1304 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 UMODL1Q5DID0 1318 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 ZNF521Q96K83 1311 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 ZNF318Q5VUA4 2279 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 MYH8P13535 1937 aa7.72□□□□□ -1.17
VPS13B-211ENST00000522802 A0A1W2PRG0 241 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 ADCY6O43306 1168 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 STRNO43815 780 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 ZNF865P0CJ78 1059 aaPredicted RBP7.71□□□□□ -1.18
VPS13B-211ENST00000522802 GLB1P16278 677 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 CYP2C18P33260 490 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 GUCY1A2P33402 732 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 LIG3P49916 1009 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 USP14P54578 494 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 NHLH1Q02575 133 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 PLS1Q14651 629 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 CCSAPQ6IQ19 270 aaPredicted RBP7.71□□□□□ -1.18
VPS13B-211ENST00000522802 LLGL2Q6P1M3 1020 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 TATDN1Q6P1N9 297 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 CCDC174Q6PII3 467 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 OTOP2Q7RTS6 562 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 ERMP1Q7Z2K6 904 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 FOXP4Q8IVH2 680 aaPredicted RBP7.71□□□□□ -1.18
VPS13B-211ENST00000522802 FAM126BQ8IXS8 530 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 TMEM199Q8N511 208 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 FAM46AQ96IP4 442 aaKnown RBP7.71□□□□□ -1.18
VPS13B-211ENST00000522802 NOL10Q9BSC4 688 aaKnown RBP7.71□□□□□ -1.18
VPS13B-211ENST00000522802 LRP2BPQ9P2M1 347 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 MTCH2Q9Y6C9 303 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 PTPRSQ13332 1948 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 SCN5AQ14524 2016 aa7.71□□□□□ -1.18
VPS13B-211ENST00000522802 TANC1Q9C0D5 1861 aa7.7□□□□□ -1.18
VPS13B-211ENST00000522802 SMIM22K7EJ46 135 aa7.7□□□□□ -1.18
VPS13B-211ENST00000522802 HLA-DOAP06340 250 aa7.7□□□□□ -1.18
VPS13B-211ENST00000522802 UBTFL1P0CB47 393 aaPredicted RBP7.7□□□□□ -1.18
VPS13B-211ENST00000522802 DRD2P14416 443 aa7.7□□□□□ -1.18
VPS13B-211ENST00000522802 AKR1A1P14550 325 aa7.7□□□□□ -1.18
VPS13B-211ENST00000522802 LIG1P18858 919 aa7.7□□□□□ -1.18
VPS13B-211ENST00000522802 RBM25P49756 843 aaKnown RBP7.7□□□□□ -1.18
VPS13B-211ENST00000522802 CDK7P50613 346 aa7.7□□□□□ -1.18
VPS13B-211ENST00000522802 DYNLL1P63167 89 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms