RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	HMX1	Q9NP08	348 aa	Predicted RBP	11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	SH3BP1	Q9Y3L3	701 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	ABCC12	Q96J65	1359 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	GPR182	O15218	404 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	GNRH1	P01148	92 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	TXN	P10599	105 aa	Known RBP	11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	EIF2AK2	P19525	551 aa	Known RBP	11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	PHEX	P78562	749 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	STIL	Q15468	1287 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	ADAT2	Q7Z6V5	191 aa	Known RBP	11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	CHMP6	Q96FZ7	201 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	CHAMP1	Q96JM3	812 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	NLRP4	Q96MN2	994 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	PPP1R2P1	Q96PQ5	205 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	MYOZ2	Q9NPC6	264 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	PLCB1	Q9NQ66	1216 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	SERPINA10	Q9UK55	444 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	MAFG	O15525	162 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	SRGAP2C	P0DJJ0	459 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	RXRA	P19793	462 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	ALDH7A1	P49419	539 aa	Known RBP	11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	MRPL4	Q9BYD3	311 aa	Known RBP	11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	SEZ6L	Q9BYH1	1024 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	ENTPD7	Q9NQZ7	604 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653		E7EWF7	191 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	THOC5	Q13769	683 aa	Known RBP	11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	SCN4B	Q8IWT1	228 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	HOMEZ	Q8IX15	550 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	ZNF557	Q8N988	423 aa	Predicted RBP	11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	DTNBP1	Q96EV8	351 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	FAM20A	Q96MK3	541 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	UTY	O14607	1347 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	ZNF521	Q96K83	1311 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	RPS6KA5	O75582	802 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	PPP4R3CP	Q6ZMV5	832 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	CCHCR1	Q8TD31	782 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	STK39	Q9UEW8	545 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	FRMD3	A2A2Y4	597 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	SSTR3	P32745	418 aa	Predicted RBP	11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	FBXW4	P57775	412 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	CFAP221	Q4G0U5	840 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	TBC1D9B	Q66K14	1250 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	CFAP65	Q6ZU64	1925 aa	Known RBP	11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	KCTD1	Q719H9	257 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	VSIG1	Q86XK7	387 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	OR6B3	Q8NGW1	331 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	GDAP1L1	Q96MZ0	367 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	YME1L1	Q96TA2	773 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	STARD7	Q9NQZ5	370 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	CSPG5	O95196	566 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	CD4	P01730	458 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	PHKA1	P46020	1223 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	C16orf72	Q14CZ0	275 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	MAPRE1	Q15691	268 aa	Known RBP	11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	KRT24	Q2M2I5	525 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	CES5A	Q6NT32	575 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	PALD1	Q9ULE6	856 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	CYP19A1	P11511	503 aa	Predicted RBP	11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	ADK	P55263	362 aa	Known RBP	11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	FAM83B	Q5T0W9	1011 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	E4F1	Q66K89	784 aa	Predicted RBP	11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	G2E3	Q7L622	706 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	YY1AP1	Q9H869	796 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	AMFR	Q9UKV5	643 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	C17orf102	A2RUQ5	167 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	GOLGA8M	H3BSY2	632 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	SORBS3	O60504	671 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	XYLB	O75191	536 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	ARHGAP4	P98171	946 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	MXD4	Q14582	209 aa	Predicted RBP	11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	BEND3	Q5T5X7	828 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	SRL	Q86TD4	932 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	PARVG	Q9HBI0	331 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	MYO1A	Q9UBC5	1043 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	ASIC3	Q9UHC3	531 aa		11.11	□□□□□ -0.63
TCF7-223	ENST00000522653	GAS2	O43903	313 aa	Known RBP	11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	SMIM24	O75264	130 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	UAP1	Q16222	522 aa	Predicted RBP	11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	NELFCD	Q8IXH7	590 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	GPC2	Q8N158	579 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	SSH3	Q8TE77	659 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	SDR42E1	Q8WUS8	393 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	EDC3	Q96F86	508 aa	Known RBP	11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	MRPL9	Q9BYD2	267 aa	Known RBP	11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	RAB17	Q9H0T7	212 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	SEPT10	Q9P0V9	454 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	CDC42BPA	Q5VT25	1732 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	CXCL11	O14625	94 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	UROD	P06132	367 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	ATP1A2	P50993	1020 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	ITIH5	Q86UX2	942 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	ARHGAP24	Q8N264	748 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	DESI2	Q9BSY9	194 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	VPS16	Q9H269	839 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	VCX3B	Q9H321	246 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	TRIM17	Q9Y577	477 aa		11.1	□□□□□ -0.63
TCF7-223	ENST00000522653	ZBTB5	O15062	677 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms