RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 PAGR1Q9BTK6 254 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 SEPT9Q9UHD8 586 aaPredicted RBP14.92□□□□□ -0.02
SYNPO-205ENST00000522122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.91□□□□□ -0.02
SYNPO-205ENST00000522122 FGGP02679 453 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 TRIM68Q6AZZ1 485 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 DNAJC7Q99615 494 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 CCSER1Q9C0I3 900 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 CD2APQ9Y5K6 639 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 LRRC37A3O60309 1634 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 ADCY1Q08828 1119 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 MAP3K21Q5TCX8 1036 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 FOXP4Q8IVH2 680 aaPredicted RBP14.91□□□□□ -0.02
SYNPO-205ENST00000522122 ZMYND12Q9H0C1 365 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 PLAAQ9Y263 795 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 PP2D1A8MPX8 630 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 H3BQF6 201 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 MDM2Q00987 491 aaPredicted RBP14.91□□□□□ -0.02
SYNPO-205ENST00000522122 GFPT1Q06210 699 aaPredicted RBP14.91□□□□□ -0.02
SYNPO-205ENST00000522122 AP3B2Q13367 1082 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 PDCLQ13371 301 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 PPP1R2P3Q6NXS1 205 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 CFAP61Q8NHU2 1237 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 DDX23Q9BUQ8 820 aaKnown RBP14.91□□□□□ -0.02
SYNPO-205ENST00000522122 NUF2Q9BZD4 464 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 NOD1Q9Y239 953 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 MAD1L1Q9Y6D9 718 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 USP17L5A8MUK1 530 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 PDXDC1Q6P996 788 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 CCDC117Q8IWD4 279 aaPredicted RBP14.91□□□□□ -0.02
SYNPO-205ENST00000522122 CFAP57Q96MR6 1250 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 CSADQ9Y600 493 aa14.91□□□□□ -0.02
SYNPO-205ENST00000522122 PLEKHG2Q9H7P9 1386 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 UBE2Q2LH0YL09 131 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 EVI5O60447 810 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 IRX4P78413 519 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 FAM83BQ5T0W9 1011 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 SLC44A5Q8NCS7 719 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 NSMCE1Q8WV22 266 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 RAB21Q9UL25 225 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 NALCNQ8IZF0 1738 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 CTTNQ14247 550 aaKnown RBP14.9□□□□□ -0.02
SYNPO-205ENST00000522122 ANKRD40Q6AI12 368 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 GUF1Q8N442 669 aaKnown RBP14.9□□□□□ -0.02
SYNPO-205ENST00000522122 ZBTB5O15062 677 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 ZNF185O15231 689 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 SASH3O75995 380 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 HOXA13P31271 388 aaPredicted RBP14.9□□□□□ -0.02
SYNPO-205ENST00000522122 SPATA4Q8NEY3 305 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 EDEM3Q9BZQ6 932 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 NCK2O43639 380 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 KCNH2Q12809 1159 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 GRM1Q13255 1194 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 ALCAMQ13740 583 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 C6orf118Q5T5N4 469 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 RIOK1Q9BRS2 568 aaKnown RBP14.9□□□□□ -0.02
SYNPO-205ENST00000522122 COA1Q9GZY4 146 aa14.9□□□□□ -0.02
SYNPO-205ENST00000522122 BAG2O95816 211 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 PPM1FP49593 454 aaPredicted RBP14.89□□□□□ -0.03
SYNPO-205ENST00000522122 RINT1Q6NUQ1 792 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 MIPOL1Q8TD10 442 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 CELF1Q92879 486 aaKnown RBP14.89□□□□□ -0.03
SYNPO-205ENST00000522122 C7orf25Q9BPX7 421 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 L1RE1Q9UN81 338 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 SFI1A8K8P3 1242 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 FAM160B1Q5W0V3 765 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 BRINP3Q76B58 766 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 PDZD4Q76G19 769 aaPredicted RBP14.89□□□□□ -0.03
SYNPO-205ENST00000522122 MMGT1Q8N4V1 131 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 GIMAP8Q8ND71 665 aaPredicted RBP14.89□□□□□ -0.03
SYNPO-205ENST00000522122 DNAJC12Q9UKB3 198 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 TACC3Q9Y6A5 838 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 CAPN9O14815 690 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 TRIM66O15016 1216 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 SESN3P58005 492 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 RNASELQ05823 741 aaKnown RBP14.89□□□□□ -0.03
SYNPO-205ENST00000522122 NKX1-1Q15270 411 aaPredicted RBP14.89□□□□□ -0.03
SYNPO-205ENST00000522122 E2F5Q15329 346 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 ZNF34Q8IZ26 560 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 CDKL2Q92772 493 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 GPR101Q96P66 508 aaPredicted RBP14.89□□□□□ -0.03
SYNPO-205ENST00000522122 GBP5Q96PP8 586 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 TCRBV5S4A2TA0A5A2 114 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 CASQ2O14958 399 aaPredicted RBP14.89□□□□□ -0.03
SYNPO-205ENST00000522122 RWDD2BP57060 319 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 PPP2R5CQ13362 524 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 LRRC1Q9BTT6 524 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 PFDN4Q9NQP4 134 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 TBK1Q9UHD2 729 aa14.89□□□□□ -0.03
SYNPO-205ENST00000522122 E9PMD0 336 aa14.88□□□□□ -0.03
SYNPO-205ENST00000522122 PODXLO00592 558 aa14.88□□□□□ -0.03
SYNPO-205ENST00000522122 ARHGAP4P98171 946 aa14.88□□□□□ -0.03
SYNPO-205ENST00000522122 HIBCHQ6NVY1 386 aaPredicted RBP14.88□□□□□ -0.03
SYNPO-205ENST00000522122 SFR1Q86XK3 245 aa14.88□□□□□ -0.03
SYNPO-205ENST00000522122 DIS3Q9Y2L1 958 aaKnown RBP14.88□□□□□ -0.03
SYNPO-205ENST00000522122 ANKRD65E5RJM6 399 aa14.88□□□□□ -0.03
SYNPO-205ENST00000522122 RPS6KA4O75676 772 aa14.88□□□□□ -0.03
SYNPO-205ENST00000522122 GCKP35557 465 aa14.88□□□□□ -0.03
SYNPO-205ENST00000522122 ADCY2Q08462 1091 aa14.88□□□□□ -0.03
SYNPO-205ENST00000522122 COASYQ13057 564 aa14.88□□□□□ -0.03
SYNPO-205ENST00000522122 TMED2Q15363 201 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms