RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 TCERG1LQ5VWI1 586 aa28.25■■■□□ 2.11
COL13A1-213ENST00000520267 RIT2Q99578 217 aa28.25■■■□□ 2.11
COL13A1-213ENST00000520267 ENOX2Q16206 610 aaKnown RBP28.24■■■□□ 2.11
COL13A1-213ENST00000520267 CAGE1Q8TC20 777 aa28.24■■■□□ 2.11
COL13A1-213ENST00000520267 SLC35C1Q96A29 364 aa28.24■■■□□ 2.11
COL13A1-213ENST00000520267 RAVER2Q9HCJ3 691 aaKnown RBP28.24■■■□□ 2.11
COL13A1-213ENST00000520267 RNF216Q9NWF9 866 aaPredicted RBP28.24■■■□□ 2.11
COL13A1-213ENST00000520267 ZNF131P52739 623 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 KLHL30Q0D2K2 578 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 EXOC3L4Q17RC7 722 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 KLHDC7AQ5VTJ3 777 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 ALS2CR12Q96Q35 445 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 KIAA1683Q9H0B3 1180 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 KCNH7Q9NS40 1196 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 ERLIN1O75477 346 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 ALAS1P13196 640 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 ZNF280AP59817 542 aaPredicted RBP28.23■■■□□ 2.11
COL13A1-213ENST00000520267 TGFB2P61812 414 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 COG2Q14746 738 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 DALRD3Q5D0E6 543 aaKnown RBP28.23■■■□□ 2.11
COL13A1-213ENST00000520267 ZNF720Q7Z2F6 126 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 LPAR1Q92633 364 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 BORCS6Q96GS4 357 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 RPGRIP1Q96KN7 1286 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 LOXHD1Q8IVV2 1947 aa28.23■■■□□ 2.11
COL13A1-213ENST00000520267 MAP2K7O14733 419 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 BUB1O43683 1085 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 UCHL3P15374 230 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 TERF2Q15554 542 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 SLC18A3Q16572 532 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 MUM1L1Q5H9M0 696 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 SEL1LQ9UBV2 794 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 ASTN2O75129 1339 aaPredicted RBP28.22■■■□□ 2.11
COL13A1-213ENST00000520267 A0A087X0T9 212 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 FAM228BP0C875 321 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 BCRP11274 1271 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 TNIP1Q15025 636 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 WDR93Q6P2C0 686 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 CREG2Q8IUH2 290 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 TXLNBQ8N3L3 684 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.22■■■□□ 2.11
COL13A1-213ENST00000520267 HOMER2Q9NSB8 354 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 ODF2LQ9ULJ1 636 aa28.22■■■□□ 2.11
COL13A1-213ENST00000520267 UTP14CQ5TAP6 766 aaKnown RBP28.21■■■□□ 2.11
COL13A1-213ENST00000520267 FAM178BQ8IXR5 827 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 COG1Q8WTW3 980 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 SUGCTQ9HAC7 445 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 SLC38A10Q9HBR0 1119 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 KCND2Q9NZV8 630 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 L1RE1Q9UN81 338 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 NFKBIEO00221 500 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 DHX15O43143 795 aaKnown RBP28.21■■■□□ 2.11
COL13A1-213ENST00000520267 ODR4Q5SWX8 454 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 MIER3Q7Z3K6 550 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 IRF2BP2Q7Z5L9 587 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 MCF2L2Q86YR7 1114 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 SIX2Q9NPC8 291 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 ADAMTS1Q9UHI8 967 aa28.21■■■□□ 2.11
COL13A1-213ENST00000520267 ARHGEF35A5YM69 484 aa28.2■■■□□ 2.11
COL13A1-213ENST00000520267 NCK2O43639 380 aa28.2■■■□□ 2.11
COL13A1-213ENST00000520267 ZBTB7AO95365 584 aa28.2■■■□□ 2.11
COL13A1-213ENST00000520267 TUBBP07437 444 aa28.2■■■□□ 2.11
COL13A1-213ENST00000520267 PRLRP16471 622 aa28.2■■■□□ 2.11
COL13A1-213ENST00000520267 GHRHRQ02643 423 aa28.2■■■□□ 2.11
COL13A1-213ENST00000520267 TNFAIP1Q13829 316 aa28.2■■■□□ 2.11
COL13A1-213ENST00000520267 SMC1AQ14683 1233 aaKnown RBP28.2■■■□□ 2.11
COL13A1-213ENST00000520267 NFIL3Q16649 462 aa28.2■■■□□ 2.11
COL13A1-213ENST00000520267 NFRKBQ6P4R8 1299 aa28.2■■■□□ 2.11
COL13A1-213ENST00000520267 RNF10Q8N5U6 811 aaKnown RBP28.2■■■□□ 2.11
COL13A1-213ENST00000520267 NOX5Q96PH1 765 aa28.2■■■□□ 2.11
COL13A1-213ENST00000520267 GUCY2CP25092 1073 aa28.2■■■□□ 2.1
COL13A1-213ENST00000520267 MRPS9P82933 396 aaKnown RBP28.2■■■□□ 2.1
COL13A1-213ENST00000520267 TKFCQ3LXA3 575 aa28.2■■■□□ 2.1
COL13A1-213ENST00000520267 GBP6Q6ZN66 633 aa28.2■■■□□ 2.1
COL13A1-213ENST00000520267 FAM186BQ8IYM0 893 aa28.2■■■□□ 2.1
COL13A1-213ENST00000520267 SPAG5Q96R06 1193 aa28.2■■■□□ 2.1
COL13A1-213ENST00000520267 OSBPL9Q96SU4 736 aa28.2■■■□□ 2.1
COL13A1-213ENST00000520267 AJAP1Q9UKB5 411 aaPredicted RBP28.2■■■□□ 2.1
COL13A1-213ENST00000520267 UBIAD1Q9Y5Z9 338 aa28.2■■■□□ 2.1
COL13A1-213ENST00000520267 HIP1RO75146 1068 aa28.19■■■□□ 2.1
COL13A1-213ENST00000520267 C2orf54Q08AI8 447 aa28.19■■■□□ 2.1
COL13A1-213ENST00000520267 MAPK7Q13164 816 aa28.19■■■□□ 2.1
COL13A1-213ENST00000520267 ITGB3BPQ13352 177 aaPredicted RBP28.19■■■□□ 2.1
COL13A1-213ENST00000520267 DAW1Q8N136 415 aa28.19■■■□□ 2.1
COL13A1-213ENST00000520267 NEK9Q8TD19 979 aa28.19■■■□□ 2.1
COL13A1-213ENST00000520267 SYTL5Q8TDW5 730 aaPredicted RBP28.19■■■□□ 2.1
COL13A1-213ENST00000520267 AGO4Q9HCK5 861 aaKnown RBP28.19■■■□□ 2.1
COL13A1-213ENST00000520267 BRCA1P38398 1863 aaKnown RBP28.19■■■□□ 2.1
COL13A1-213ENST00000520267 CTNND1O60716 968 aaKnown RBP28.18■■■□□ 2.1
COL13A1-213ENST00000520267 FLOT1O75955 427 aa28.18■■■□□ 2.1
COL13A1-213ENST00000520267 PSMC2P35998 433 aaKnown RBP28.18■■■□□ 2.1
COL13A1-213ENST00000520267 NIPA1Q7RTP0 329 aa28.18■■■□□ 2.1
COL13A1-213ENST00000520267 SAMD7Q7Z3H4 446 aa28.18■■■□□ 2.1
COL13A1-213ENST00000520267 RBM46Q8TBY0 533 aaKnown RBP28.18■■■□□ 2.1
COL13A1-213ENST00000520267 GBP3Q9H0R5 595 aa28.18■■■□□ 2.1
COL13A1-213ENST00000520267 HYOU1Q9Y4L1 999 aa28.18■■■□□ 2.1
COL13A1-213ENST00000520267 UBE4BO95155 1302 aa28.18■■■□□ 2.1
COL13A1-213ENST00000520267 NAP1L1P55209 391 aaKnown RBP28.18■■■□□ 2.1
COL13A1-213ENST00000520267 PTK2Q05397 1052 aa28.18■■■□□ 2.1
COL13A1-213ENST00000520267 PCNX4Q63HM2 1172 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms