RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 CEP170P1Q96L14 293 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 MAGEF1Q9HAY2 307 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 ANO10Q9NW15 660 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 ADCY3O60266 1144 aa17.24■□□□□ 0.35
TRPS1-206ENST00000517323 XRCC5P13010 732 aaKnown RBP17.24■□□□□ 0.35
TRPS1-206ENST00000517323 CYBAP13498 195 aa17.24■□□□□ 0.35
TRPS1-206ENST00000517323 PRCPP42785 496 aa17.24■□□□□ 0.35
TRPS1-206ENST00000517323 AMPD3Q01432 767 aa17.24■□□□□ 0.35
TRPS1-206ENST00000517323 DHX40Q8IX18 779 aaKnown RBP17.24■□□□□ 0.35
TRPS1-206ENST00000517323 DAW1Q8N136 415 aa17.24■□□□□ 0.35
TRPS1-206ENST00000517323 EVPLQ92817 2033 aa17.24■□□□□ 0.35
TRPS1-206ENST00000517323 CCDC34Q96HJ3 373 aa17.24■□□□□ 0.35
TRPS1-206ENST00000517323 EXOC1Q9NV70 894 aa17.24■□□□□ 0.35
TRPS1-206ENST00000517323 TRIM17Q9Y577 477 aa17.24■□□□□ 0.35
TRPS1-206ENST00000517323 LOXHD1Q8IVV2 1947 aa17.24■□□□□ 0.35
TRPS1-206ENST00000517323 TRIM49BA6NDI0 452 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 PPP1R3GB7ZBB8 358 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 PGK1P00558 417 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 OATP04181 439 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 LGALS2P05162 132 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 IQSEC1Q6DN90 963 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 SFR1Q86XK3 245 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 MSL3Q8N5Y2 521 aaKnown RBP17.23■□□□□ 0.35
TRPS1-206ENST00000517323 RDM1Q8NG50 284 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 RAET1EQ8TD07 263 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 CCDC43Q96MW1 224 aaKnown RBP17.23■□□□□ 0.35
TRPS1-206ENST00000517323 BEGAINQ9BUH8 593 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 GRPEL1Q9HAV7 217 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 HIP1RO75146 1068 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 MMP3P08254 477 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 PMS1P54277 932 aaKnown RBP17.23■□□□□ 0.35
TRPS1-206ENST00000517323 LAMC2Q13753 1193 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 HERC4Q5GLZ8 1057 aaPredicted RBP17.23■□□□□ 0.35
TRPS1-206ENST00000517323 UNC13DQ70J99 1090 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 PPTC7Q8NI37 304 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 AZI2Q9H6S1 392 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 CTNND2Q9UQB3 1225 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 STK24Q9Y6E0 443 aa17.23■□□□□ 0.35
TRPS1-206ENST00000517323 RHOBTB3O94955 611 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 LYPLA2O95372 231 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 IGBP1P78318 339 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 MAPK7Q13164 816 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 DRP2Q13474 957 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 IQCB1Q15051 598 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 SH3TC2Q8TF17 1288 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 KIFC3Q9BVG8 833 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 CYP26B1Q9NR63 512 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 WBP1LQ9NX94 342 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 PTCH2Q9Y6C5 1203 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 AP5Z1O43299 807 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 MAP2K1Q02750 393 aaPredicted RBP17.22■□□□□ 0.35
TRPS1-206ENST00000517323 KCNA1Q09470 495 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 PLCB4Q15147 1175 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 ZNF658Q5TYW1 1059 aaPredicted RBP17.22■□□□□ 0.35
TRPS1-206ENST00000517323 MFSD14CQ5VZR4 134 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 ZNF668Q96K58 619 aaPredicted RBP17.22■□□□□ 0.35
TRPS1-206ENST00000517323 C16orf70Q9BSU1 422 aa17.22■□□□□ 0.35
TRPS1-206ENST00000517323 ZBTB42B2RXF5 422 aa17.21■□□□□ 0.35
TRPS1-206ENST00000517323 NMT1P30419 496 aaKnown RBP17.21■□□□□ 0.35
TRPS1-206ENST00000517323 EHHADHQ08426 723 aa17.21■□□□□ 0.35
TRPS1-206ENST00000517323 FAM102BQ5T8I3 360 aa17.21■□□□□ 0.35
TRPS1-206ENST00000517323 FAM200AQ8TCP9 573 aa17.21■□□□□ 0.35
TRPS1-206ENST00000517323 TMEM143Q96AN5 459 aa17.21■□□□□ 0.35
TRPS1-206ENST00000517323 XPNPEP1Q9NQW7 623 aa17.21■□□□□ 0.35
TRPS1-206ENST00000517323 SAGE1Q9NXZ1 904 aa17.21■□□□□ 0.35
TRPS1-206ENST00000517323 DBR1Q9UK59 544 aaKnown RBP17.21■□□□□ 0.35
TRPS1-206ENST00000517323 TRPC6Q9Y210 931 aa17.21■□□□□ 0.35
TRPS1-206ENST00000517323 LAMA2P24043 3122 aaKnown RBP17.21■□□□□ 0.35
TRPS1-206ENST00000517323 TRIP12Q14669 1992 aaPredicted RBP17.21■□□□□ 0.35
TRPS1-206ENST00000517323 LGR5O75473 907 aa17.21■□□□□ 0.34
TRPS1-206ENST00000517323 GJB1P08034 283 aa17.21■□□□□ 0.34
TRPS1-206ENST00000517323 MYBP10242 640 aa17.21■□□□□ 0.34
TRPS1-206ENST00000517323 PLCB2Q00722 1185 aa17.21■□□□□ 0.34
TRPS1-206ENST00000517323 ZC2HC1CQ53FD0 456 aaPredicted RBP17.21■□□□□ 0.34
TRPS1-206ENST00000517323 XKR3Q5GH77 459 aa17.21■□□□□ 0.34
TRPS1-206ENST00000517323 NELFCDQ8IXH7 590 aa17.21■□□□□ 0.34
TRPS1-206ENST00000517323 BSNDQ8WZ55 320 aa17.21■□□□□ 0.34
TRPS1-206ENST00000517323 ERO1AQ96HE7 468 aa17.21■□□□□ 0.34
TRPS1-206ENST00000517323 FAM184BQ9ULE4 1060 aa17.21■□□□□ 0.34
TRPS1-206ENST00000517323 PCDHA2Q9Y5H9 948 aa17.21■□□□□ 0.34
TRPS1-206ENST00000517323 SLC26A4O43511 780 aa17.2■□□□□ 0.34
TRPS1-206ENST00000517323 C6orf222P0C671 652 aaPredicted RBP17.2■□□□□ 0.34
TRPS1-206ENST00000517323 KCNB1Q14721 858 aa17.2■□□□□ 0.34
TRPS1-206ENST00000517323 FAM160B1Q5W0V3 765 aa17.2■□□□□ 0.34
TRPS1-206ENST00000517323 LRRC71Q8N4P6 559 aa17.2■□□□□ 0.34
TRPS1-206ENST00000517323 MYCT1Q8N699 235 aa17.2■□□□□ 0.34
TRPS1-206ENST00000517323 AFAP1L1Q8TED9 768 aa17.2■□□□□ 0.34
TRPS1-206ENST00000517323 CEP89Q96ST8 783 aa17.2■□□□□ 0.34
TRPS1-206ENST00000517323 KAT6AQ92794 2004 aa17.2■□□□□ 0.34
TRPS1-206ENST00000517323 TBCAO75347 108 aaKnown RBP17.19■□□□□ 0.34
TRPS1-206ENST00000517323 MYL1P05976 194 aa17.19■□□□□ 0.34
TRPS1-206ENST00000517323 XRCC6P12956 609 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRPS1-206ENST00000517323 MUTP22033 750 aa17.19■□□□□ 0.34
TRPS1-206ENST00000517323 NCAPHQ15003 741 aa17.19■□□□□ 0.34
TRPS1-206ENST00000517323 L1TD1Q5T7N2 865 aaKnown RBP17.19■□□□□ 0.34
TRPS1-206ENST00000517323 EMID1Q96A84 441 aaPredicted RBP17.19■□□□□ 0.34
TRPS1-206ENST00000517323 EMSYQ7Z589 1322 aa17.19■□□□□ 0.34
TRPS1-206ENST00000517323 SYNRGQ9UMZ2 1314 aa17.19■□□□□ 0.34
TRPS1-206ENST00000517323 FRMD3A2A2Y4 597 aa17.19■□□□□ 0.34
TRPS1-206ENST00000517323 FAM13AO94988 1023 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms