RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 AMNQ9BXJ7 453 aa4.54□□□□□ -1.68
RNU4-49P-201ENST00000516080 OR10A5Q9H207 317 aa4.54□□□□□ -1.68
RNU4-49P-201ENST00000516080 UCKL1Q9NWZ5 548 aa4.54□□□□□ -1.68
RNU4-49P-201ENST00000516080 SNTG2Q9NY99 539 aa4.54□□□□□ -1.68
RNU4-49P-201ENST00000516080 Q9UFV3 132 aa4.54□□□□□ -1.68
RNU4-49P-201ENST00000516080 SFMBT1Q9UHJ3 866 aa4.54□□□□□ -1.68
RNU4-49P-201ENST00000516080 PUF60Q9UHX1 559 aaKnown RBP4.54□□□□□ -1.68
RNU4-49P-201ENST00000516080 SLC12A8A0AV02 714 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 SCDO00767 359 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 FOXP2O15409 715 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 KCNQ2O43526 872 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 ACO1P21399 889 aaKnown RBP4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 CD83Q01151 205 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 FOXE3Q13461 319 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 NOLC1Q14978 699 aaKnown RBP eCLIP4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 KANK2Q63ZY3 851 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 TMEM200BQ69YZ2 307 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 RNF207Q6ZRF8 634 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 LARP4Q71RC2 724 aaKnown RBP eCLIP4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 RTKN2Q8IZC4 609 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 HIPK4Q8NE63 616 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 CALML6Q8TD86 181 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 ASB15Q8WXK1 588 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 GBP4Q96PP9 640 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 OR14A2Q96R54 314 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 SRPK1Q96SB4 655 aaKnown RBP4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 DNAJC7Q99615 494 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 MRIQ9BWK5 157 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 PLA2G12BQ9BX93 195 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 MRPL4Q9BYD3 311 aaKnown RBP4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 ZNF341Q9BYN7 854 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 KIAA1683Q9H0B3 1180 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 OR10A2Q9H208 303 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 NELFAQ9H3P2 528 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 CDC42EP3Q9UKI2 254 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 COQ6Q9Y2Z9 468 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 ASB1Q9Y576 335 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 B3GALT1Q9Y5Z6 326 aa4.53□□□□□ -1.68
RNU4-49P-201ENST00000516080 PMS2P1A4D2B8 440 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 MATN2O00339 956 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 SUV39H1O43463 412 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 HIP1RO75146 1068 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 MAFO75444 373 aaPredicted RBP4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 RASGRP1O95267 797 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 SLPIP03973 132 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 SDHAP31040 664 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 MRE11P49959 708 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 MOGSQ13724 837 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 PCOLCEQ15113 449 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 TBR1Q16650 682 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 NRN1LQ496H8 165 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 GRAMD4Q6IC98 578 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 LRSAM1Q6UWE0 723 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 Q6ZSN1 163 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 OVCH1Q7RTY7 1134 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 FILIP1Q7Z7B0 1213 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 ZFPM1Q8IX07 1006 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 JMYQ8N9B5 988 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 SLC7A14Q8TBB6 771 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 THAP3Q8WTV1 239 aaPredicted RBP4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 DLG3Q92796 817 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 HS3ST3A1Q9Y663 406 aa4.52□□□□□ -1.69
RNU4-49P-201ENST00000516080 TCRBV16S1A1N1A0A5B0 115 aa4.51□□□□□ -1.69
RNU4-49P-201ENST00000516080 PRAMEF22A3QJZ6 481 aa4.51□□□□□ -1.69
RNU4-49P-201ENST00000516080 GOLGA6L22H0YM25 854 aa4.51□□□□□ -1.69
RNU4-49P-201ENST00000516080 APEX1P27695 318 aaKnown RBP4.51□□□□□ -1.69
RNU4-49P-201ENST00000516080 MAP3K12Q12852 859 aa4.51□□□□□ -1.69
RNU4-49P-201ENST00000516080 DUSP8Q13202 625 aa4.51□□□□□ -1.69
RNU4-49P-201ENST00000516080 USP39Q53GS9 565 aaKnown RBP4.51□□□□□ -1.69
RNU4-49P-201ENST00000516080 MIIPQ5JXC2 388 aa4.51□□□□□ -1.69
RNU4-49P-201ENST00000516080 MAMDC4Q6UXC1 1216 aa4.51□□□□□ -1.69
RNU4-49P-201ENST00000516080 C2orf69Q8N8R5 385 aa4.51□□□□□ -1.69
RNU4-49P-201ENST00000516080 CFHR4Q92496 578 aa4.51□□□□□ -1.69
RNU4-49P-201ENST00000516080 SCLYQ96I15 445 aa4.51□□□□□ -1.69
RNU4-49P-201ENST00000516080 HHEXQ03014 270 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 TMEM132BQ14DG7 1078 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 ARHGAP44Q17R89 818 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 TM4SF20Q53R12 229 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 TMEM177Q53S58 311 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 BRAPQ7Z569 592 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 ADGRE4PQ86SQ3 457 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 IGSF22Q8N9C0 903 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 E2F7Q96AV8 911 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 ZNF503Q96F45 646 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 BOCQ9BWV1 1114 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 PCED1AQ9H1Q7 454 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 AURKAIP1Q9NWT8 199 aaPredicted RBP4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 PLA2G3Q9NZ20 509 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 FAM184BQ9ULE4 1060 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 VWA7Q9Y334 891 aa4.5□□□□□ -1.69
RNU4-49P-201ENST00000516080 RASSF10A6NK89 507 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 B4E1Z4 1266 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 NPIPB8E9PQR5 432 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 SLC26A4O43511 780 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 KCNA6P17658 529 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 ACRV1P26436 265 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 MSX2P35548 267 aaPredicted RBP4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 SESN2P58004 480 aaPredicted RBP4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 IRF9Q00978 393 aa4.49□□□□□ -1.69
RNU4-49P-201ENST00000516080 HGFACQ04756 655 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms