RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 C4orf19Q8IY42 314 aa29.08■■■□□ 2.25
DDR1-279ENST00000515529 CCDC43Q96MW1 224 aaKnown RBP29.08■■■□□ 2.25
DDR1-279ENST00000515529 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.08■■■□□ 2.253e-7■□□□□ 11.3
DDR1-279ENST00000515529 NIFKQ9BYG3 293 aaKnown RBP29.08■■■□□ 2.25
DDR1-279ENST00000515529 TANC1Q9C0D5 1861 aa29.08■■■□□ 2.25
DDR1-279ENST00000515529 TMOD1P28289 359 aa29.07■■■□□ 2.24
DDR1-279ENST00000515529 ATP2C1P98194 919 aaPredicted RBP29.07■■■□□ 2.24
DDR1-279ENST00000515529 WDR81Q562E7 1941 aa29.07■■■□□ 2.24
DDR1-279ENST00000515529 HABP4Q5JVS0 413 aaKnown RBP29.07■■■□□ 2.24
DDR1-279ENST00000515529 IER5Q5VY09 327 aa29.07■■■□□ 2.24
DDR1-279ENST00000515529 HAUS3Q68CZ6 603 aa29.07■■■□□ 2.24
DDR1-279ENST00000515529 NME8Q8N427 588 aa29.07■■■□□ 2.24
DDR1-279ENST00000515529 LRWD1Q9UFC0 647 aa29.07■■■□□ 2.24
DDR1-279ENST00000515529 SLITRK3O94933 977 aa29.06■■■□□ 2.24
DDR1-279ENST00000515529 MRPS6P82932 125 aaKnown RBP29.06■■■□□ 2.24
DDR1-279ENST00000515529 C16orf59Q7L2K0 433 aa29.06■■■□□ 2.24
DDR1-279ENST00000515529 MAP7D2Q96T17 732 aa29.06■■■□□ 2.24
DDR1-279ENST00000515529 HSD17B14Q9BPX1 270 aa29.06■■■□□ 2.24
DDR1-279ENST00000515529 STK24Q9Y6E0 443 aa29.06■■■□□ 2.24
DDR1-279ENST00000515529 YWHABP31946 246 aaKnown RBP29.05■■■□□ 2.24
DDR1-279ENST00000515529 PDIA5Q14554 519 aa29.05■■■□□ 2.24
DDR1-279ENST00000515529 PLA2G4FQ68DD2 849 aa29.05■■■□□ 2.24
DDR1-279ENST00000515529 TRAF7Q6Q0C0 670 aa29.05■■■□□ 2.24
DDR1-279ENST00000515529 ANO5Q75V66 913 aa29.05■■■□□ 2.24
DDR1-279ENST00000515529 CEP170P1Q96L14 293 aa29.05■■■□□ 2.24
DDR1-279ENST00000515529 JPH2Q9BR39 696 aaPredicted RBP29.05■■■□□ 2.24
DDR1-279ENST00000515529 TUFT1Q9NNX1 390 aa29.05■■■□□ 2.24
DDR1-279ENST00000515529 TMEM150BA6NC51 233 aa29.04■■■□□ 2.24
DDR1-279ENST00000515529 ZBBXA8MT70 800 aa29.04■■■□□ 2.24
DDR1-279ENST00000515529 NBNO60934 754 aa29.04■■■□□ 2.24
DDR1-279ENST00000515529 STBD1O95210 358 aa29.04■■■□□ 2.24
DDR1-279ENST00000515529 FAM26DQ5JW98 314 aa29.04■■■□□ 2.24
DDR1-279ENST00000515529 EFCAB12Q6NXP0 572 aa29.04■■■□□ 2.24
DDR1-279ENST00000515529 OTOP2Q7RTS6 562 aa29.04■■■□□ 2.24
DDR1-279ENST00000515529 SUGCTQ9HAC7 445 aa29.04■■■□□ 2.24
DDR1-279ENST00000515529 CYP26B1Q9NR63 512 aa29.04■■■□□ 2.24
DDR1-279ENST00000515529 WRAP73Q9P2S5 460 aaPredicted RBP29.04■■■□□ 2.24
DDR1-279ENST00000515529 PPME1Q9Y570 386 aa29.04■■■□□ 2.24
DDR1-279ENST00000515529 CDY2AQ9Y6F7 541 aa29.04■■■□□ 2.24
DDR1-279ENST00000515529 TMEM62Q0P6H9 643 aa29.03■■■□□ 2.24
DDR1-279ENST00000515529 TARBP2Q15633 366 aaKnown RBP29.03■■■□□ 2.24
DDR1-279ENST00000515529 XKR9Q5GH70 373 aa29.03■■■□□ 2.24
DDR1-279ENST00000515529 ARL6IP4Q66PJ3 421 aaKnown RBP29.03■■■□□ 2.24
DDR1-279ENST00000515529 EXOC8Q8IYI6 725 aa29.03■■■□□ 2.24
DDR1-279ENST00000515529 HERVK_113Q902F9 699 aa29.03■■■□□ 2.24
DDR1-279ENST00000515529 SH2D3AQ9BRG2 576 aa29.03■■■□□ 2.24
DDR1-279ENST00000515529 POLR3CQ9BUI4 534 aaPredicted RBP29.03■■■□□ 2.24
DDR1-279ENST00000515529 AKT3Q9Y243 479 aa29.03■■■□□ 2.24
DDR1-279ENST00000515529 TRPV2Q9Y5S1 764 aa29.03■■■□□ 2.24
DDR1-279ENST00000515529 LYPLA2O95372 231 aa29.02■■■□□ 2.24
DDR1-279ENST00000515529 CHRNA1P02708 482 aa29.02■■■□□ 2.24
DDR1-279ENST00000515529 CXCL10P02778 98 aa29.02■■■□□ 2.24
DDR1-279ENST00000515529 CCT6AP40227 531 aaKnown RBP29.02■■■□□ 2.24
DDR1-279ENST00000515529 DNM2P50570 870 aa29.02■■■□□ 2.24
DDR1-279ENST00000515529 CLCN3P51790 818 aa29.02■■■□□ 2.24
DDR1-279ENST00000515529 SF3A1Q15459 793 aaKnown RBP29.02■■■□□ 2.24
DDR1-279ENST00000515529 CNKSR3Q6P9H4 555 aa29.02■■■□□ 2.24
DDR1-279ENST00000515529 KIAA0319LQ8IZA0 1049 aa29.02■■■□□ 2.24
DDR1-279ENST00000515529 LRRC71Q8N4P6 559 aa29.02■■■□□ 2.24
DDR1-279ENST00000515529 SLC7A3Q8WY07 619 aa29.02■■■□□ 2.24
DDR1-279ENST00000515529 SCN5AQ14524 2016 aa29.02■■■□□ 2.24
DDR1-279ENST00000515529 POLGP54098 1239 aaPredicted RBP29.01■■■□□ 2.23
DDR1-279ENST00000515529 NPEPPSP55786 919 aa29.01■■■□□ 2.23
DDR1-279ENST00000515529 MBTPS1Q14703 1052 aa29.01■■■□□ 2.23
DDR1-279ENST00000515529 FOXD4L5Q5VV16 416 aaPredicted RBP29.01■■■□□ 2.23
DDR1-279ENST00000515529 KRT79Q5XKE5 535 aa29.01■■■□□ 2.23
DDR1-279ENST00000515529 CATSPER3Q86XQ3 398 aa29.01■■■□□ 2.23
DDR1-279ENST00000515529 IGSF22Q8N9C0 903 aa29.01■■■□□ 2.23
DDR1-279ENST00000515529 FOXD4L4Q8WXT5 416 aaPredicted RBP29.01■■■□□ 2.23
DDR1-279ENST00000515529 ANKEF1Q9NU02 776 aa29.01■■■□□ 2.23
DDR1-279ENST00000515529 GINS2Q9Y248 185 aa29.01■■■□□ 2.23
DDR1-279ENST00000515529 TRIOBPQ9H2D6 2365 aa29.01■■■□□ 2.23
DDR1-279ENST00000515529 VWA3AA6NCI4 1184 aa29■■■□□ 2.23
DDR1-279ENST00000515529 MED24O75448 989 aa29■■■□□ 2.23
DDR1-279ENST00000515529 ZSCAN22P10073 491 aaPredicted RBP29■■■□□ 2.23
DDR1-279ENST00000515529 RPA1P27694 616 aa29■■■□□ 2.23
DDR1-279ENST00000515529 RFC5P40937 340 aa29■■■□□ 2.23
DDR1-279ENST00000515529 MGAT3Q09327 533 aa29■■■□□ 2.23
DDR1-279ENST00000515529 FAM173BQ6P4H8 233 aa29■■■□□ 2.23
DDR1-279ENST00000515529 SNX29Q8TEQ0 813 aa29■■■□□ 2.23
DDR1-279ENST00000515529 SEPT8Q92599 483 aa29■■■□□ 2.23
DDR1-279ENST00000515529 CELF4Q9BZC1 486 aaKnown RBP29■■■□□ 2.23
DDR1-279ENST00000515529 MAFO75444 373 aaPredicted RBP28.99■■■□□ 2.23
DDR1-279ENST00000515529 BAIAP3O94812 1187 aa28.99■■■□□ 2.23
DDR1-279ENST00000515529 SPATA31C1P0DKV0 1188 aa28.99■■■□□ 2.23
DDR1-279ENST00000515529 GHRP10912 638 aa28.99■■■□□ 2.23
DDR1-279ENST00000515529 GPNMBQ14956 572 aa28.99■■■□□ 2.23
DDR1-279ENST00000515529 LRIT3Q3SXY7 679 aa28.99■■■□□ 2.23
DDR1-279ENST00000515529 ZNF396Q96N95 335 aaPredicted RBP28.99■■■□□ 2.23
DDR1-279ENST00000515529 SCLT1Q96NL6 688 aa28.99■■■□□ 2.23
DDR1-279ENST00000515529 NACC1Q96RE7 527 aa28.99■■■□□ 2.23
DDR1-279ENST00000515529 VTNP04004 478 aa28.98■■■□□ 2.23
DDR1-279ENST00000515529 XRCC6P12956 609 aaKnown RBP eCLIP28.98■■■□□ 2.23
DDR1-279ENST00000515529 MUTP22033 750 aa28.98■■■□□ 2.23
DDR1-279ENST00000515529 KCNJ6P48051 423 aa28.98■■■□□ 2.23
DDR1-279ENST00000515529 CEBPZQ03701 1054 aaKnown RBP28.98■■■□□ 2.23
DDR1-279ENST00000515529 IKBKEQ14164 716 aa28.98■■■□□ 2.23
DDR1-279ENST00000515529 IL17AQ16552 155 aa28.98■■■□□ 2.23
DDR1-279ENST00000515529 ZNF710Q8N1W2 664 aa28.98■■■□□ 2.23
DDR1-279ENST00000515529 PIGOQ8TEQ8 1089 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms