RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 GABRDO14764 452 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 HSP90B1P14625 803 aaKnown RBP7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 RGS3P49796 1198 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 HTRA3P83110 453 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 SLC6A3Q01959 620 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 ADCY1Q08828 1119 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 ITKQ08881 620 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 SMAD4Q13485 552 aaKnown RBP7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 MOGSQ13724 837 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 OGFOD2Q6N063 350 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 NME9Q86XW9 330 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 AHCYL2Q96HN2 611 aaKnown RBP7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 FAM84AQ96KN4 292 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 FOXB1Q99853 325 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 IRF2BPLQ9H1B7 796 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 GALNT8Q9NY28 637 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 ZFP69BQ9UJL9 534 aa7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 NOC2LQ9Y3T9 749 aaKnown RBP7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 FARP2O94887 1054 aaPredicted RBP7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 PI3P19957 117 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 INAVAQ3KP66 663 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 TTC38Q5R3I4 469 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 ZBTB41Q5SVQ8 909 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 ZNF648Q5T619 568 aaPredicted RBP7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 SYDE2Q5VT97 1194 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 ATG14Q6ZNE5 492 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 FRMD7Q6ZUT3 714 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 CXorf67Q86X51 503 aaPredicted RBP7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 FAM129CQ86XR2 697 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 C7orf31Q8N865 590 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 KYQ8NBH2 561 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 FNIP1Q8TF40 1166 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 ZBTB8AQ96BR9 441 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 MAML3Q96JK9 1138 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 TUBGCP5Q96RT8 1024 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 SMAD5Q99717 465 aaKnown RBP7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 TACO1Q9BSH4 297 aaKnown RBP7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 MYL10Q9BUA6 226 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 PCDH18Q9HCL0 1135 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 ARHGAP20Q9P2F6 1191 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 RNF114Q9Y508 228 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 IRAK3Q9Y616 596 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 PMF1-BGLAPU3KQ54 211 aa7.04□□□□□ -1.28
HMGCS1-207ENST00000514610 C1QTNF9P0C862 333 aa7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 IARSP41252 1262 aaKnown RBP7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 ECE1P42892 770 aa7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 IL13RA1P78552 427 aa7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 DLX2Q07687 328 aaPredicted RBP7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 UNQ6494/PRO21346Q6UXR6 183 aa7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 PHYKPLQ8IUZ5 450 aa7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 STPG3Q8N7X2 389 aa7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 LMBR1Q8WVP7 490 aa7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 E2F7Q96AV8 911 aa7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 MENTQ9BUN1 341 aa7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 KCND1Q9NSA2 647 aa7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 SPATA6Q9NWH7 488 aaPredicted RBP7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 USP36Q9P275 1121 aaKnown RBP7.03□□□□□ -1.28
HMGCS1-207ENST00000514610 PRPF6O94906 941 aaKnown RBP7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 CLEC2LP0C7M8 214 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 COL6A1P12109 1028 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 SCAND1P57086 179 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 FAPQ12884 760 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 KLF1Q13351 362 aaPredicted RBP7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 ABCB5Q2M3G0 1257 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 PRR31Q5SQ13 230 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 PRAMEF9Q5VWM5 478 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 KANK2Q63ZY3 851 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 SLFN12LQ6IEE8 588 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 KANSL1Q7Z3B3 1105 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 CLIC6Q96NY7 704 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 BTBD2Q9BX70 525 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 PRDM12Q9H4Q4 367 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 CD320Q9NPF0 282 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 CROTQ9UKG9 612 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 SMG5Q9UPR3 1016 aaKnown RBP7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 THRAP3Q9Y2W1 955 aaKnown RBP7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 PPP2R3BQ9Y5P8 575 aa7.02□□□□□ -1.29
HMGCS1-207ENST00000514610 PRSS38A1L453 326 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 FZD9O00144 591 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 H2AFYO75367 372 aaKnown RBP7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 GPR3P46089 330 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 MANFP55145 182 aaKnown RBP7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 MLLT6P55198 1093 aaPredicted RBP7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 ROM1Q03395 351 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 STILQ15468 1287 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 VWA3BQ502W6 1294 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 CNKSR3Q6P9H4 555 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 ESPNLQ6ZVH7 1005 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 POU5F2Q8N7G0 328 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 TTLL6Q8N841 843 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 TGFBRAP1Q8WUH2 860 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 ANO3Q9BYT9 981 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 OR10A5Q9H207 317 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 KLHL42Q9P2K6 505 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 KCTD3Q9Y597 815 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 TNKSO95271 1327 aa7.01□□□□□ -1.29
HMGCS1-207ENST00000514610 TCAF2A6NFQ2 919 aa7□□□□□ -1.29
HMGCS1-207ENST00000514610 GOLGA8AA7E2F4 631 aa7□□□□□ -1.29
HMGCS1-207ENST00000514610 GOLGA8BA8MQT2 603 aa7□□□□□ -1.29
HMGCS1-207ENST00000514610 APOL3O95236 402 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms