RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 RAX2Q96IS3 184 aa6.31□□□□□ -1.4
CALCOCO2-222ENST00000514006 SLC2A13Q96QE2 648 aa6.31□□□□□ -1.4
CALCOCO2-222ENST00000514006 MAP3K14Q99558 947 aa6.31□□□□□ -1.4
CALCOCO2-222ENST00000514006 ACO2Q99798 780 aaKnown RBP6.31□□□□□ -1.4
CALCOCO2-222ENST00000514006 AP5M1Q9H0R1 490 aa6.31□□□□□ -1.4
CALCOCO2-222ENST00000514006 WNT8AQ9H1J5 351 aa6.31□□□□□ -1.4
CALCOCO2-222ENST00000514006 ADAMTS10Q9H324 1103 aa6.31□□□□□ -1.4
CALCOCO2-222ENST00000514006 POFUT1Q9H488 388 aa6.31□□□□□ -1.4
CALCOCO2-222ENST00000514006 RC3H2Q9HBD1 1191 aaKnown RBP6.31□□□□□ -1.4
CALCOCO2-222ENST00000514006 SLAMF8Q9P0V8 285 aa6.31□□□□□ -1.4
CALCOCO2-222ENST00000514006 PUF60Q9UHX1 559 aaKnown RBP6.31□□□□□ -1.4
CALCOCO2-222ENST00000514006 PCDHB4Q9Y5E5 795 aa6.31□□□□□ -1.4
CALCOCO2-222ENST00000514006 RNF225M0QZC1 329 aaPredicted RBP6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 LPLP06858 475 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 MMEP08473 750 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 MSL3P1P0C860 447 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 MYBP10242 640 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 PRKCAP17252 672 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 UAP1L1Q3KQV9 507 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 GRAMD1BQ3KR37 738 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 HSP90AB4PQ58FF6 505 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 PITRM1Q5JRX3 1037 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 RALGPS1Q5JS13 557 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 TTC38Q5R3I4 469 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 THEMISQ8N1K5 641 aaPredicted RBP6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 FAM43AQ8N2R8 423 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 CAMKK1Q8N5S9 505 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 AUTS2Q8WXX7 1259 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 MISP3Q96FF7 219 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 DCAF5Q96JK2 942 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 TNIP3Q96KP6 325 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 GBP4Q96PP9 640 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 ALPK1Q96QP1 1244 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 TUBGCP5Q96RT8 1024 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 TPSG1Q9NRR2 321 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 LMCD1Q9NZU5 365 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 TUBD1Q9UJT1 453 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 ACSL6Q9UKU0 697 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 PHTF1Q9UMS5 762 aa6.3□□□□□ -1.4
CALCOCO2-222ENST00000514006 ST20-MTHFSA0A0A6YYL1 179 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 PRSS38A1L453 326 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 A6NNZ2 444 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 ELL2O00472 640 aaPredicted RBP6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 TPP1O14773 563 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 NRDCO43847 1150 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 DTNBO60941 627 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 APOL3O95236 402 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 ZBED1O96006 694 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 SLC16A1P53985 500 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 GJA9P57773 515 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 ZNF280AP59817 542 aaPredicted RBP6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 HERVK_113P62684 666 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 CHRNEQ04844 493 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 ZBTB41Q5SVQ8 909 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 MBNL2Q5VZF2 373 aaKnown RBP6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 BICRALQ6AI39 1079 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 USP45Q70EL2 814 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 APBB1IPQ7Z5R6 666 aaPredicted RBP6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 ZDHHC13Q8IUH4 622 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 SPPL2CQ8IUH8 684 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 PPM1NQ8N819 430 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 NETO2Q8NC67 525 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 HIPK4Q8NE63 616 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 CLEC4DQ8WXI8 215 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 ASB15Q8WXK1 588 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 GJA10Q969M2 543 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 MVB12AQ96EY5 273 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 MAML3Q96JK9 1138 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 MYL10Q9BUA6 226 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 SERPINB13Q9UIV8 391 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 TMEM59LQ9UK28 342 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 ASB1Q9Y576 335 aa6.29□□□□□ -1.4
CALCOCO2-222ENST00000514006 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 PRPF6O94906 941 aaKnown RBP6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 GLI4P10075 376 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 PDCP20941 246 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 GRIN1Q05586 938 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 LLGL1Q15334 1064 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 MUM1Q2TAK8 710 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 CCDC149Q6ZUS6 474 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 MILR1Q7Z6M3 343 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 RTN4RL1Q86UN2 441 aaPredicted RBP6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 CILP2Q8IUL8 1156 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 ENAHQ8N8S7 591 aaPredicted RBP6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 PARD3BQ8TEW8 1205 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 COA7Q96BR5 231 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 C1GALT1C1Q96EU7 318 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 PLCD4Q9BRC7 762 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 PDGFDQ9GZP0 370 aaPredicted RBP6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 KCTD10Q9H3F6 313 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 NLRC4Q9NPP4 1024 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 KLHL11Q9NVR0 708 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 BSDC1Q9NW68 430 aaPredicted RBP6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 DPP7Q9UHL4 492 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 PALD1Q9ULE6 856 aa6.28□□□□□ -1.4
CALCOCO2-222ENST00000514006 TCRBV5S2A0A599 114 aa6.27□□□□□ -1.41
CALCOCO2-222ENST00000514006 PRR19A6NJB7 356 aa6.27□□□□□ -1.41
CALCOCO2-222ENST00000514006 FAM227AF5H4B4 570 aa6.27□□□□□ -1.41
CALCOCO2-222ENST00000514006 GOLGA6L22H0YM25 854 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms