RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 MAGEL2Q9UJ55 1249 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 TESMINQ9Y4I5 508 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 GOLGA6L22H0YM25 854 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 DVL2O14641 736 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 KCNQ2O43526 872 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 CDC14BO60729 498 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 TACR2P21452 398 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 GJA4P35212 333 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 ETV4P43268 484 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 SELENOPP49908 381 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 STAT5BP51692 787 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 HERVK_113P62684 666 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 DGCR2P98153 550 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 MOGSQ13724 837 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 TMEM132BQ14DG7 1078 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 PCOLCEQ15113 449 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 CATSPEREQ5SY80 951 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 BRAPQ7Z569 592 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 FILIP1Q7Z7B0 1213 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 GPR135Q8IZ08 494 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 BCL6BQ8N143 479 aaPredicted RBP3.57□□□□□ -1.84
PDGFC-208ENST00000512711 ERCC4Q92889 916 aaPredicted RBP3.57□□□□□ -1.84
PDGFC-208ENST00000512711 FOXRED1Q96CU9 486 aaPredicted RBP3.57□□□□□ -1.84
PDGFC-208ENST00000512711 DNAJC2Q99543 621 aaKnown RBP3.57□□□□□ -1.84
PDGFC-208ENST00000512711 PLA2G12BQ9BX93 195 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 CELF4Q9BZC1 486 aaKnown RBP3.57□□□□□ -1.84
PDGFC-208ENST00000512711 C12orf65Q9H3J6 166 aaKnown RBP3.57□□□□□ -1.84
PDGFC-208ENST00000512711 SRRDQ9UH36 339 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 NR2E1Q9Y466 385 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 TCAF1Q9Y4C2 921 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 B3GALT1Q9Y5Z6 326 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 HS3ST3A1Q9Y663 406 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 PTCH2Q9Y6C5 1203 aa3.57□□□□□ -1.84
PDGFC-208ENST00000512711 MUSKO15146 869 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 CUTAO60888 179 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 EFCAB14O75071 495 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 HMGCRP04035 888 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 ACO1P21399 889 aaKnown RBP3.56□□□□□ -1.84
PDGFC-208ENST00000512711 STAT3P40763 770 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 MRE11P49959 708 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 HMGA2P52926 109 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 ANTXR2P58335 489 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 FOXL1Q12952 345 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 TMEM177Q53S58 311 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 USP30Q70CQ3 517 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 CXXC5Q7LFL8 322 aaKnown RBP3.56□□□□□ -1.84
PDGFC-208ENST00000512711 OTOP2Q7RTS6 562 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 IFNL2Q8IZJ0 200 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 OR14K1Q8NGZ2 314 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 THAP3Q8WTV1 239 aaPredicted RBP3.56□□□□□ -1.84
PDGFC-208ENST00000512711 ARMC5Q96C12 935 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 OR14A2Q96R54 314 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 CDK5RAP1Q96SZ6 601 aaKnown RBP3.56□□□□□ -1.84
PDGFC-208ENST00000512711 OR10A5Q9H207 317 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 VPS11Q9H270 941 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 KCNH7Q9NS40 1196 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 ING1Q9UK53 422 aaPredicted RBP3.56□□□□□ -1.84
PDGFC-208ENST00000512711 OAZ3Q9UMX2 235 aa3.56□□□□□ -1.84
PDGFC-208ENST00000512711 A0A0G2JNJ9 132 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 SLC12A8A0AV02 714 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 NPIPB8E9PQR5 432 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 TRAF5O00463 557 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 PPP1R12AO14974 1030 aaPredicted RBP3.55□□□□□ -1.84
PDGFC-208ENST00000512711 FOXP2O15409 715 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 ARHGAP6O43182 974 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 RAD17O75943 681 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 NAT1P18440 290 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 COMTP21964 271 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 MECP2P51608 486 aaKnown RBP3.55□□□□□ -1.84
PDGFC-208ENST00000512711 HGFACQ04756 655 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 FOXE3Q13461 319 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 SQSTM1Q13501 440 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 PRKD1Q15139 912 aaPredicted RBP3.55□□□□□ -1.84
PDGFC-208ENST00000512711 USP39Q53GS9 565 aaKnown RBP3.55□□□□□ -1.84
PDGFC-208ENST00000512711 ZMAT1Q5H9K5 638 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 ZC3H12BQ5HYM0 836 aaKnown RBP3.55□□□□□ -1.84
PDGFC-208ENST00000512711 MAMDC4Q6UXC1 1216 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 RTN4RL1Q86UN2 441 aaPredicted RBP3.55□□□□□ -1.84
PDGFC-208ENST00000512711 C2orf69Q8N8R5 385 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 HIPK4Q8NE63 616 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 MKL1Q969V6 931 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 SCYL1Q96KG9 808 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 NCOA5Q9HCD5 579 aaKnown RBP3.55□□□□□ -1.84
PDGFC-208ENST00000512711 Q9UFV3 132 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 SFMBT1Q9UHJ3 866 aa3.55□□□□□ -1.84
PDGFC-208ENST00000512711 CDK11AQ9UQ88 783 aaPredicted RBP3.55□□□□□ -1.84
PDGFC-208ENST00000512711 M0R2C6 588 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 KRT37O76014 449 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 SDSP20132 328 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 SDHAP31040 664 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 IRF9Q00978 393 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 KLF10Q13118 480 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 ADAM15Q13444 863 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 NFYCQ13952 458 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 SAFB2Q14151 953 aaKnown RBP eCLIP3.54□□□□□ -1.84
PDGFC-208ENST00000512711 ZNF460Q14592 562 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 NRN1LQ496H8 165 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 C2orf27AQ580R0 203 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 SPTY2D1Q68D10 685 aaPredicted RBP3.54□□□□□ -1.84
PDGFC-208ENST00000512711 TMEM200BQ69YZ2 307 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 488.4 ms