RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 AGO3Q9H9G7 860 aaKnown RBP13.09□□□□□ -0.31
SH3RF1-205ENST00000511421 TRPV2Q9Y5S1 764 aa13.09□□□□□ -0.31
SH3RF1-205ENST00000511421 SQORQ9Y6N5 450 aa13.09□□□□□ -0.31
SH3RF1-205ENST00000511421 MYH9P35579 1960 aaKnown RBP13.09□□□□□ -0.31
SH3RF1-205ENST00000511421 KDM3AQ9Y4C1 1321 aa13.09□□□□□ -0.31
SH3RF1-205ENST00000511421 LCHNA4D1U4 455 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 WNT7AO00755 349 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 AMHP03971 560 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 FOSL2P15408 326 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 HMGN5P82970 282 aaKnown RBP13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 GUCY1B3Q02153 619 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 TAP1Q03518 808 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 PPP2R5CQ13362 524 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 ADGRE1Q14246 886 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 TSHZ1Q6ZSZ6 1077 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 MYOCDQ8IZQ8 938 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 LINC01465Q8N7H1 131 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 TBC1D32Q96NH3 1257 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 RAD9AQ99638 391 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 UPF2Q9HAU5 1272 aaKnown RBP13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 NRBP2Q9NSY0 501 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 CEP131Q9UPN4 1083 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 MICAL3Q7RTP6 2002 aa13.08□□□□□ -0.31
SH3RF1-205ENST00000511421 CD2BP2O95400 341 aaKnown RBP13.08□□□□□ -0.32
SH3RF1-205ENST00000511421 TARBP2Q15633 366 aaKnown RBP13.08□□□□□ -0.32
SH3RF1-205ENST00000511421 SPRED2Q7Z698 418 aa13.08□□□□□ -0.32
SH3RF1-205ENST00000511421 IL27Q8NEV9 243 aa13.08□□□□□ -0.32
SH3RF1-205ENST00000511421 TOP1MTQ969P6 601 aa13.08□□□□□ -0.32
SH3RF1-205ENST00000511421 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
SH3RF1-205ENST00000511421 ZBED2Q9BTP6 218 aa13.08□□□□□ -0.32
SH3RF1-205ENST00000511421 SIP14410 1827 aa13.08□□□□□ -0.32
SH3RF1-205ENST00000511421 M0QZ92 97 aa13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 MAGEB2O15479 319 aa13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 ST18O60284 1047 aa13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 CD52P31358 61 aa13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 HTRA4P83105 476 aaPredicted RBP13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 SPIRE1Q08AE8 756 aa13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 FAM117BQ6P1L5 589 aa13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 USP38Q8NB14 1042 aa13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 FBXO18Q8NFZ0 1043 aa13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 MAFAQ8NHW3 353 aaPredicted RBP13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 CEP89Q96ST8 783 aa13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 NIFKQ9BYG3 293 aaKnown RBP13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 CDHR5Q9HBB8 845 aa13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 WDR81Q562E7 1941 aa13.07□□□□□ -0.32
SH3RF1-205ENST00000511421 EPOPA6NHQ4 379 aa13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 ENPP3O14638 875 aa13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 CLCN3P51790 818 aa13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 SAFBQ15424 915 aaKnown RBP eCLIP13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 XKR3Q5GH77 459 aa13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 RTN4RL1Q86UN2 441 aaPredicted RBP13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 SLFN12Q8IYM2 578 aa13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 METTL13Q8N6R0 699 aa13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 BANK1Q8NDB2 785 aa13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 LINC01599Q8WXQ3 324 aa13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 GAS2L1Q99501 681 aaPredicted RBP13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 CERS4Q9HA82 394 aa13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 PADI3Q9ULW8 664 aa13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 EVPLQ92817 2033 aa13.06□□□□□ -0.32
SH3RF1-205ENST00000511421 TMEM150BA6NC51 233 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 GPR32O75388 356 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 VTNP04004 478 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 PSMC5P62195 406 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 EPHA7Q15375 998 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 EFCAB12Q6NXP0 572 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 LRRC71Q8N4P6 559 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 FAM184AQ8NB25 1140 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 TMEM40Q8WWA1 233 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 TMX3Q96JJ7 454 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 MTMR9Q96QG7 549 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 FOXP1Q9H334 677 aaPredicted RBP13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 WRAP73Q9P2S5 460 aaPredicted RBP13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 INSL6Q9Y581 213 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 LINC01553A4QN01 128 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 RFXAPO00287 272 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 MARCH6O60337 910 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 UPP2O95045 317 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 BAG4O95429 457 aaKnown RBP13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 P4HBP07237 508 aaKnown RBP13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 QARSP47897 775 aaKnown RBP13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 KIZQ2M2Z5 673 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 TMEM266Q2M3C6 531 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 ANO5Q75V66 913 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 TMX1Q9H3N1 280 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 SEPT9Q9UHD8 586 aaPredicted RBP13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 GINS2Q9Y248 185 aa13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 NOC2LQ9Y3T9 749 aaKnown RBP13.05□□□□□ -0.32
SH3RF1-205ENST00000511421 EYSQ5T1H1 3165 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 IGKV6-21A0A0C4DH24 114 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 DDX11L8A8MPP1 907 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 NEMFO60524 1076 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 CRYBB1P53674 252 aaPredicted RBP13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 ERVK-21P61565 698 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 TBC1D8BQ0IIM8 1120 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 PAK2Q13177 524 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 CALCRLQ16602 461 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 MTERF2Q49AM1 385 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 CRIPAKQ8N1N5 446 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 ARNTL2Q8WYA1 636 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms