RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 NPEPPSP55786 919 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 PDIA5Q14554 519 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 MARCH8Q5T0T0 291 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 ATL3Q6DD88 541 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 RUFY4Q6ZNE9 571 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 USP49Q70CQ1 688 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 ANO5Q75V66 913 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 CABP7Q86V35 215 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 C4orf19Q8IY42 314 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 RASSF8Q8NHQ8 419 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 KCNG4Q8TDN1 519 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 PIGOQ8TEQ8 1089 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 DHX38Q92620 1227 aaKnown RBP11.64□□□□□ -0.55
NR1I3-227ENST00000510951 SYMPKQ92797 1274 aaKnown RBP11.64□□□□□ -0.55
NR1I3-227ENST00000510951 CDK5RAP3Q96JB5 506 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 SPATA32Q96LK8 384 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 CCDC43Q96MW1 224 aaKnown RBP11.64□□□□□ -0.55
NR1I3-227ENST00000510951 POLR3CQ9BUI4 534 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-227ENST00000510951 SEZ6LQ9BYH1 1024 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 NRBP2Q9NSY0 501 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 DDX19AQ9NUU7 478 aaKnown RBP11.64□□□□□ -0.55
NR1I3-227ENST00000510951 TMEM39AQ9NV64 488 aa11.64□□□□□ -0.55
NR1I3-227ENST00000510951 SRPRBQ9Y5M8 271 aaKnown RBP11.64□□□□□ -0.55
NR1I3-227ENST00000510951 TNRC18O15417 2968 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-227ENST00000510951 UMODL1Q5DID0 1318 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 KDM3AQ9Y4C1 1321 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 TRIM43BA6NCK2 446 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 RRN3P2A6NIE6 340 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 PPP6R2O75170 966 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 C22orf31O95567 290 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 KLRC1P26715 233 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 UBA7P41226 1012 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 ADAM17P78536 824 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 MLLT1Q03111 559 aaPredicted RBP11.63□□□□□ -0.55
NR1I3-227ENST00000510951 KARSQ15046 597 aaKnown RBP11.63□□□□□ -0.55
NR1I3-227ENST00000510951 XKR9Q5GH70 373 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 ZNF484Q5JVG2 852 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 MTHFD1LQ6UB35 978 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 SERINC5Q86VE9 423 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 LRRC71Q8N4P6 559 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 ZNF579Q8NAF0 562 aaKnown RBP11.63□□□□□ -0.55
NR1I3-227ENST00000510951 LEO1Q8WVC0 666 aaPredicted RBP11.63□□□□□ -0.55
NR1I3-227ENST00000510951 TNPO1Q92973 898 aaKnown RBP11.63□□□□□ -0.55
NR1I3-227ENST00000510951 TRIM43Q96BQ3 446 aaPredicted RBP11.63□□□□□ -0.55
NR1I3-227ENST00000510951 EPSTI1Q96J88 318 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 CEP170P1Q96L14 293 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 AK8Q96MA6 479 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 TOX2Q96NM4 488 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 FAM49AQ9H0Q0 323 aaPredicted RBP11.63□□□□□ -0.55
NR1I3-227ENST00000510951 HIPK3Q9H422 1215 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 PRKAG2Q9UGJ0 569 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 TBX21Q9UL17 535 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 KIAA1024Q9UPX6 916 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 TET1Q8NFU7 2136 aa11.63□□□□□ -0.55
NR1I3-227ENST00000510951 MBLAC1A4D2B0 266 aaPredicted RBP11.62□□□□□ -0.55
NR1I3-227ENST00000510951 USO1O60763 962 aaKnown RBP11.62□□□□□ -0.55
NR1I3-227ENST00000510951 CTSHP09668 335 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 PLCG1P19174 1290 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 TXLNAP40222 546 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 THPOP40225 353 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 CLCN3P51790 818 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 TBC1D8BQ0IIM8 1120 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 PTK7Q13308 1070 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 GRB10Q13322 594 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 TARBP2Q15633 366 aaKnown RBP11.62□□□□□ -0.55
NR1I3-227ENST00000510951 OTUD6AQ7L8S5 288 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 KCNK18Q7Z418 384 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 METTL13Q8N6R0 699 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 PNMA5Q96PV4 448 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 PPP1R16BQ96T49 567 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 NOC4LQ9BVI4 516 aaKnown RBP11.62□□□□□ -0.55
NR1I3-227ENST00000510951 NIFKQ9BYG3 293 aaKnown RBP11.62□□□□□ -0.55
NR1I3-227ENST00000510951 CYP26B1Q9NR63 512 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 PCDHA7Q9UN72 937 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 STK24Q9Y6E0 443 aa11.62□□□□□ -0.55
NR1I3-227ENST00000510951 MORC2Q9Y6X9 1032 aaPredicted RBP11.62□□□□□ -0.55
NR1I3-227ENST00000510951 ARHGEF35A5YM69 484 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 E9PMD0 336 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 CUTAO60888 179 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 LYPLA2O95372 231 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 RAG1P15918 1043 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 ITGB8P26012 769 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 CYP2C18P33260 490 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 RARRES1P49788 294 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 POLGP54098 1239 aaPredicted RBP11.61□□□□□ -0.55
NR1I3-227ENST00000510951 CCL23P55773 120 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 TMEM62Q0P6H9 643 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 TRIM71Q2Q1W2 868 aaKnown RBP11.61□□□□□ -0.55
NR1I3-227ENST00000510951 TMEM119Q4V9L6 283 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 AXDND1Q5T1B0 1012 aaPredicted RBP11.61□□□□□ -0.55
NR1I3-227ENST00000510951 CCDC155Q8N6L0 562 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 DNAJB3Q8WWF6 145 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 CALML4Q96GE6 196 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 NACC1Q96RE7 527 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 SCAND2PQ9GZW5 306 aaPredicted RBP11.61□□□□□ -0.55
NR1I3-227ENST00000510951 SUGCTQ9HAC7 445 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 ANKEF1Q9NU02 776 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 RCOR1Q9UKL0 485 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 PCDHA2Q9Y5H9 948 aa11.61□□□□□ -0.55
NR1I3-227ENST00000510951 NR2E3Q9Y5X4 410 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms