RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 UPP2O95045 317 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 ATG7O95352 703 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 RPLP2P05387 115 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 GHRP10912 638 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 ATP2B1P20020 1258 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 ADAM17P78536 824 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 DEFB103AP81534 67 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 GRIN1Q05586 938 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 TMEM62Q0P6H9 643 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 TRIM29Q14134 588 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 ZNF174Q15697 407 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 CCDC85BQ15834 202 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 TCTN1Q2MV58 587 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 PLEKHG4Q58EX7 1191 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 MARCH8Q5T0T0 291 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 LRCH2Q5VUJ6 765 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 FOXD4L5Q5VV16 416 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 CCDC60Q8IWA6 550 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 SMAP1Q8IYB5 467 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 ATP8B4Q8TF62 1192 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 FOXD4L4Q8WXT5 416 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 APBB2Q92870 758 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 RAD9AQ99638 391 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 TEKT3Q9BXF9 490 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 IFIH1Q9BYX4 1025 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 BRMS1Q9HCU9 246 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 GABBR1Q9UBS5 961 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 GINS2Q9Y248 185 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 TANC1Q9C0D5 1861 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 LOXHD1Q8IVV2 1947 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 MBLAC1A4D2B0 266 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 GTPBP6O43824 516 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 ZNF862O60290 1169 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 STBD1O95210 358 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 GJB5O95377 273 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 CHRNA1P02708 482 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 KLRC1P26715 233 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 MCM7P33993 719 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 MRPS6P82932 125 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 ZNF484Q5JVG2 852 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 FAM26DQ5JW98 314 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 TTC38Q5R3I4 469 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 MCTP1Q6DN14 999 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 MTHFD1LQ6UB35 978 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 LRRC15Q8TF66 581 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 RIT2Q99578 217 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 DISC1Q9NRI5 854 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 NRBP2Q9NSY0 501 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 MTUS1Q9ULD2 1270 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 RBM19Q9Y4C8 960 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 INSL6Q9Y581 213 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 PCDHA2Q9Y5H9 948 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 CDY2AQ9Y6F7 541 aa9.84□□□□□ -0.83
PDLIM5-213ENST00000509357 TMEM150BA6NC51 233 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 ZBTB42B2RXF5 422 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 RFXAPO00287 272 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 BRD1O95696 1058 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 IBSPP21815 317 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 SFNP31947 248 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 JAK3P52333 1124 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 TAP1Q03518 808 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 LPIN1Q14693 890 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 PTPAQ15257 358 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 SKIV2LQ15477 1246 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 ECM1Q16610 540 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 MIER3Q7Z3K6 550 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 RPAINQ86UA6 219 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 NME8Q8N427 588 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 METTL13Q8N6R0 699 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 BBXQ8WY36 941 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 FAM167AQ96KS9 214 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 USP28Q96RU2 1077 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 YME1L1Q96TA2 773 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 CEP131Q9UPN4 1083 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 MAFBQ9Y5Q3 323 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 TRPV2Q9Y5S1 764 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 CLIC4Q9Y696 253 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 EVPLQ92817 2033 aa9.83□□□□□ -0.84
PDLIM5-213ENST00000509357 IGSF9BQ9UPX0 1349 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 A0A0C4DFX4 3053 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 SMIM35A0A1B0GVV1 85 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 LCHNA4D1U4 455 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 POTEMA6NI47 508 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 PP2D1A8MPX8 630 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 H3BQV1 296 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 ZBTB39O15060 712 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 NEMFO60524 1076 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 CD52P31358 61 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 PAK2Q13177 524 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 ADGRE1Q14246 886 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 SAFBQ15424 915 aaKnown RBP eCLIP9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 FBXO47Q5MNV8 452 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 TSHZ1Q6ZSZ6 1077 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 USP38Q8NB14 1042 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 TGS1Q96RS0 853 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 CEP89Q96ST8 783 aa9.82□□□□□ -0.84
PDLIM5-213ENST00000509357 NAP1L4Q99733 375 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms