RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 HIP1O00291 1037 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 PGK1P00558 417 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 CLTBP09497 229 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 ZNF865P0CJ78 1059 aaPredicted RBP8.73□□□□□ -1.01
CCSER1-208ENST00000509109 MCCP23508 829 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 CDC27P30260 824 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 ACVR2BQ13705 512 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 CCDC96Q2M329 555 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 RCSD1Q6JBY9 416 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 XKR5Q6UX68 686 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 CCDC129Q6ZRS4 1044 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 SMC5Q8IY18 1101 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 DEFB123Q8N688 67 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 PCSK9Q8NBP7 692 aaKnown RBP8.73□□□□□ -1.01
CCSER1-208ENST00000509109 FERMT2Q96AC1 680 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 MEGF10Q96KG7 1140 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 GLT1D1Q96MS3 346 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 YTHDC1Q96MU7 727 aaKnown RBP8.73□□□□□ -1.01
CCSER1-208ENST00000509109 KRTAP4-8Q9BYQ9 185 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 LNPKQ9C0E8 428 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 STARD7Q9NQZ5 370 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 PDLIM7Q9NR12 457 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 RNF146Q9NTX7 359 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 TACC3Q9Y6A5 838 aa8.73□□□□□ -1.01
CCSER1-208ENST00000509109 A0A0D9SFI3 127 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 ASB14A6NK59 587 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 FOXP2O15409 715 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 PQBP1O60828 265 aaKnown RBP8.72□□□□□ -1.01
CCSER1-208ENST00000509109 ADAMTS4O75173 837 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 FAM13AO94988 1023 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 FGRP09769 529 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 C6orf222P0C671 652 aaPredicted RBP8.72□□□□□ -1.01
CCSER1-208ENST00000509109 TOP1P11387 765 aaKnown RBP8.72□□□□□ -1.01
CCSER1-208ENST00000509109 TAL1P17542 331 aaPredicted RBP8.72□□□□□ -1.01
CCSER1-208ENST00000509109 CST5P28325 142 aaPredicted RBP8.72□□□□□ -1.01
CCSER1-208ENST00000509109 ACLYP53396 1101 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 RRP12Q5JTH9 1297 aaKnown RBP8.72□□□□□ -1.01
CCSER1-208ENST00000509109 PRSS36Q5K4E3 855 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 VPS53Q5VIR6 699 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 KCTD1Q719H9 257 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 ARMCX2Q7L311 632 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 CHD1LQ86WJ1 897 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 GALNT11Q8NCW6 608 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 RILPL2Q969X0 211 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 FAM227BQ96M60 508 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 MPHOSPH6Q99547 160 aaKnown RBP8.72□□□□□ -1.01
CCSER1-208ENST00000509109 POP1Q99575 1024 aaKnown RBP8.72□□□□□ -1.01
CCSER1-208ENST00000509109 SSBP4Q9BWG4 385 aaPredicted RBP8.72□□□□□ -1.01
CCSER1-208ENST00000509109 CHRDQ9H2X0 955 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 A1CFQ9NQ94 594 aaKnown RBP8.72□□□□□ -1.01
CCSER1-208ENST00000509109 DIAPH3Q9NSV4 1193 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 SALL4Q9UJQ4 1053 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 CCPG1Q9ULG6 757 aa8.72□□□□□ -1.01
CCSER1-208ENST00000509109 PRUNE2Q8WUY3 3088 aa8.71□□□□□ -1.01
CCSER1-208ENST00000509109 LOC102724159A0A0B4J2E5 919 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 DCDC2CA8MYV0 355 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 SNAI1O95863 264 aaPredicted RBP8.71□□□□□ -1.02
CCSER1-208ENST00000509109 FGAP02671 866 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 ICAM1P05362 532 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 HSPD1P10809 573 aaKnown RBP8.71□□□□□ -1.02
CCSER1-208ENST00000509109 ALAS1P13196 640 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 RAG1P15918 1043 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 NPR3P17342 541 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 EPHA1P21709 976 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 NOVP48745 357 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 TLE2Q04725 743 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 NMIQ13287 307 aaPredicted RBP8.71□□□□□ -1.02
CCSER1-208ENST00000509109 PWP2Q15269 919 aaKnown RBP8.71□□□□□ -1.02
CCSER1-208ENST00000509109 CCDC144BQ3MJ40 725 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 CCDC178Q5BJE1 867 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 CCDC174Q6PII3 467 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 MFSD6Q6ZSS7 791 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 ANKRD33Q7Z3H0 272 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 CCDC144CPQ8IYA2 1237 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 AGGF1Q8N302 714 aaeCLIP8.71□□□□□ -1.02
CCSER1-208ENST00000509109 FAM133AQ8N9E0 248 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 ESR2Q92731 530 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 TTC14Q96N46 770 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 TOX2Q96NM4 488 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 HHIPQ96QV1 700 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 MUC3BQ9H195 1237 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 AKTIPQ9H8T0 292 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 IL17RBQ9NRM6 502 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 TCP11L1Q9NUJ3 509 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 ADD3Q9UEY8 706 aaKnown RBP8.71□□□□□ -1.02
CCSER1-208ENST00000509109 FOXD3Q9UJU5 478 aaPredicted RBP8.71□□□□□ -1.02
CCSER1-208ENST00000509109 USTQ9Y2C2 406 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 ELP1O95163 1332 aa8.71□□□□□ -1.02
CCSER1-208ENST00000509109 ZNF213O14771 459 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 EREGO14944 169 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 KIAA0355O15063 1070 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 TLR3O15455 904 aaKnown RBP8.7□□□□□ -1.02
CCSER1-208ENST00000509109 ZEB2O60315 1214 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 FZD6O60353 706 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 NMT2O60551 498 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 SERPINB4P48594 390 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 GJA9P57773 515 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 NUCB1Q02818 461 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 AKNAD1Q5T1N1 836 aa8.7□□□□□ -1.02
CCSER1-208ENST00000509109 GPATCH4Q5T3I0 446 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms