RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 PTPN22Q9Y2R2 807 aa16.03■□□□□ 0.16
HMGCLL1-208ENST00000508459 DYNC1LI2O43237 492 aaPredicted RBP16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 MMP3P08254 477 aa16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 CST5P28325 142 aaPredicted RBP16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 SLC12A3P55017 1021 aa16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 ASIC1P78348 528 aa16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 PPP2R5AQ15172 486 aa16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 CAMK4Q16566 473 aa16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 XKR9Q5GH70 373 aa16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 UNC13DQ70J99 1090 aa16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 CCDC60Q8IWA6 550 aaPredicted RBP16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 MLKLQ8NB16 471 aa16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 AFG1LQ8WV93 481 aa16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 CEP170P1Q96L14 293 aa16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 TSEN34Q9BSV6 310 aaKnown RBP16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 BLOC1S4Q9NUP1 217 aa16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 DDX20Q9UHI6 824 aaKnown RBP16.02■□□□□ 0.16
HMGCLL1-208ENST00000508459 A0A087X0B3 334 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 H3BRB1 525 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 RPN1P04843 607 aaKnown RBP16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 INHAP05111 366 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 LGALS2P05162 132 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 TMOD1P28289 359 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 AFMP43652 599 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 RARRES1P49788 294 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 SMTNP53814 917 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 RTP1P59025 263 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 MDM2Q00987 491 aaPredicted RBP16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 DPYDQ12882 1025 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 MCM6Q14566 821 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 FBXO46Q6PJ61 603 aaPredicted RBP16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 TUT1Q9H6E5 874 aaKnown RBP16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 ATP6V0A4Q9HBG4 840 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 XPNPEP3Q9NQH7 507 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 CYP26B1Q9NR63 512 aa16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 SEPT9Q9UHD8 586 aaPredicted RBP16.01■□□□□ 0.15
HMGCLL1-208ENST00000508459 WDR81Q562E7 1941 aa16■□□□□ 0.15
HMGCLL1-208ENST00000508459 MOXD2PA6NHM9 499 aa16■□□□□ 0.15
HMGCLL1-208ENST00000508459 E9PMD0 336 aa16■□□□□ 0.15
HMGCLL1-208ENST00000508459 ECM2O94769 699 aaPredicted RBP16■□□□□ 0.15
HMGCLL1-208ENST00000508459 C6orf222P0C671 652 aaPredicted RBP16■□□□□ 0.15
HMGCLL1-208ENST00000508459 MAPTP10636 758 aaKnown RBP16■□□□□ 0.15
HMGCLL1-208ENST00000508459 PRKCSHP14314 528 aaPredicted RBP16■□□□□ 0.15
HMGCLL1-208ENST00000508459 CYP11B2P19099 503 aa16■□□□□ 0.15
HMGCLL1-208ENST00000508459 POLGP54098 1239 aaPredicted RBP16■□□□□ 0.15
HMGCLL1-208ENST00000508459 TBC1D8BQ0IIM8 1120 aa16■□□□□ 0.15
HMGCLL1-208ENST00000508459 PADI6Q6TGC4 694 aa16■□□□□ 0.15
HMGCLL1-208ENST00000508459 LRSAM1Q6UWE0 723 aa16■□□□□ 0.15
HMGCLL1-208ENST00000508459 FAM43BQ6ZT52 329 aaPredicted RBP16■□□□□ 0.15
HMGCLL1-208ENST00000508459 DDX12PQ92771 950 aa16■□□□□ 0.15
HMGCLL1-208ENST00000508459 IFT74Q96LB3 600 aa16■□□□□ 0.15
HMGCLL1-208ENST00000508459 UIMC1Q96RL1 719 aa16■□□□□ 0.15
HMGCLL1-208ENST00000508459 MTG1Q9BT17 334 aaPredicted RBP16■□□□□ 0.15
HMGCLL1-208ENST00000508459 PARVGQ9HBI0 331 aa16■□□□□ 0.15
HMGCLL1-208ENST00000508459 TRPC6Q9Y210 931 aa16■□□□□ 0.15
HMGCLL1-208ENST00000508459 NRCAMQ92823 1304 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 ASAP2O43150 1006 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 RHOBTB3O94955 611 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 FAM13AO94988 1023 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 F2P00734 622 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 ELNP15502 786 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 SARSP49591 514 aaKnown RBP15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 TPM4P67936 248 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 MXD4Q14582 209 aaPredicted RBP15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 COBLL1Q53SF7 1204 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 GNASQ5JWF2 1037 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 PRAMEF19Q5SWL8 479 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 UTP14CQ5TAP6 766 aaKnown RBP15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 ZNF658Q5TYW1 1059 aaPredicted RBP15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 RINT1Q6NUQ1 792 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 PIGOQ8TEQ8 1089 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 PLIN2Q99541 437 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 OLFML3Q9NRN5 406 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 PCDHA5Q9Y5H7 936 aa15.99■□□□□ 0.15
HMGCLL1-208ENST00000508459 UBE4BO95155 1302 aa15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 SYCE3A1L190 88 aa15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 HSPA8P11142 646 aaKnown RBP15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 NLRP12P59046 1061 aa15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 PTPN11Q06124 597 aaPredicted RBP15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 PNOCQ13519 176 aa15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 C1orf186Q6ZWK4 172 aa15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 ANO5Q75V66 913 aa15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 MTRQ99707 1265 aa15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 TSPY26PQ9H489 355 aa15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 PRDM10Q9NQV6 1147 aa15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 PANK4Q9NVE7 773 aa15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 PTCH2Q9Y6C5 1203 aa15.98■□□□□ 0.15
HMGCLL1-208ENST00000508459 SYNRGQ9UMZ2 1314 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 BICDL2A1A5D9 508 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 FRMD3A2A2Y4 597 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 KBTBD13C9JR72 458 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 PSMA7O14818 248 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 IDEP14735 1019 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 TYRO3Q06418 890 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 DMP1Q13316 513 aaPredicted RBP15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 TFDP1Q14186 410 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 DHX8Q14562 1220 aaKnown RBP15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 ECM1Q16610 540 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms