RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 GEN1Q17RS7 908 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 CST9Q5W186 159 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PPP4R4Q6NUP7 873 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 SWSAP1Q6NVH7 229 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 SLC39A5Q6ZMH5 540 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 REXO1Q8N1G1 1221 aaKnown RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 MTMR14Q8NCE2 650 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 FLCNQ8NFG4 579 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 AGBL1Q96MI9 1066 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 TLE6Q9H808 572 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 ITGB1BP2Q9UKP3 347 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 TACC3Q9Y6A5 838 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GOLGA6L9A6NEM1 432 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 PER1O15534 1290 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 MYZAPP0CAP1 466 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 IRF1P10914 325 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 RABGGTBP53611 331 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GPM6BQ13491 265 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 MAPRE1Q15691 268 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 CCDC144BQ3MJ40 725 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 PPM1LQ5SGD2 360 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 PRPF38BQ5VTL8 546 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 CREB3L3Q68CJ9 461 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 RINLQ6ZS11 566 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GET4Q7L5D6 327 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TDRD5Q8NAT2 981 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 CACTINQ8WUQ7 758 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 AFG1LQ8WV93 481 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 N4BP2L2Q92802 583 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 CEP170P1Q96L14 293 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 RIPOR3Q96MK2 946 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TINF2Q9BSI4 451 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 SLC7A5P2Q9GIP4 190 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 IQCGQ9H095 443 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 USP44Q9H0E7 712 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 MRPL44Q9H9J2 332 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ARAP2Q8WZ64 1704 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 KDM3AQ9Y4C1 1321 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 POTEB3A0JP26 581 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 H0YGN5 161 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GCNT3O95395 438 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 SGPL1O95470 568 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 CCDC192P0DO97 292 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 DNA2P51530 1060 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 OSTNP61366 133 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TSPY1Q01534 308 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 IFFO1Q0D2I5 559 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 NR1H3Q13133 447 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ITGA7Q13683 1181 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 PPP2R5AQ15172 486 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ZNF174Q15697 407 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 NFRKBQ6P4R8 1299 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 POTEBQ6S5H4 581 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 RYBPQ8N488 228 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 C12orf50Q8NA57 414 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 HDAC7Q8WUI4 952 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 SLC7A3Q8WY07 619 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 PUS7LQ9H0K6 701 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ANTXR1Q9H6X2 564 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 CCSER2Q9H7U1 834 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 JPH1Q9HDC5 661 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 CGNQ9P2M7 1197 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 K7ENM7 598 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TBC1D12O60347 775 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 DEXIO95424 95 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 RPLP2P05387 115 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 RNF219Q5W0B1 726 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 DAAM2Q86T65 1068 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 RIOX2Q8IUF8 465 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 SMAP1Q8IYB5 467 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 RPGRIP1Q96KN7 1286 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 NACC1Q96RE7 527 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 COPRSQ9NQ92 184 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 KMT5AQ9NQR1 393 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 DACT1Q9NYF0 836 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 IPO11Q9UI26 975 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 RPAP1Q9BWH6 1393 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 A0A1W2PQ45 241 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 A0A1W2PQY0 241 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GOLGA6CA6NDK9 693 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GOLGA6BA6NDN3 693 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 DDTLA6NHG4 134 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 N4BP3O15049 544 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 NMT2O60551 498 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 PEX14O75381 377 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GMNNO75496 209 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 STAM2O75886 525 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 FOSP01100 380 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ICAM1P05362 532 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GOLGA6DP0CG33 693 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 PDE1AP54750 535 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TNNC1P63316 161 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 IFI16Q16666 785 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 KIAA0753Q2KHM9 967 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 CCDC65Q8IXS2 484 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms