RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 SLITRK3O94933 977 aa16.79■□□□□ 0.28
RNF4-210ENST00000508235 C22orf31O95567 290 aa16.79■□□□□ 0.28
RNF4-210ENST00000508235 YWHABP31946 246 aaKnown RBP16.79■□□□□ 0.28
RNF4-210ENST00000508235 TBC1D8BQ0IIM8 1120 aa16.79■□□□□ 0.28
RNF4-210ENST00000508235 CTTNQ14247 550 aaKnown RBP16.79■□□□□ 0.28
RNF4-210ENST00000508235 TARBP2Q15633 366 aaKnown RBP16.79■□□□□ 0.28
RNF4-210ENST00000508235 FAM26DQ5JW98 314 aa16.79■□□□□ 0.28
RNF4-210ENST00000508235 RUFY4Q6ZNE9 571 aa16.79■□□□□ 0.28
RNF4-210ENST00000508235 DNAJB3Q8WWF6 145 aa16.79■□□□□ 0.28
RNF4-210ENST00000508235 POLR3CQ9BUI4 534 aaPredicted RBP16.79■□□□□ 0.28
RNF4-210ENST00000508235 LRWD1Q9UFC0 647 aa16.79■□□□□ 0.28
RNF4-210ENST00000508235 STBD1O95210 358 aa16.78■□□□□ 0.28
RNF4-210ENST00000508235 FGBP02675 491 aa16.78■□□□□ 0.28
RNF4-210ENST00000508235 ZSCAN22P10073 491 aaPredicted RBP16.78■□□□□ 0.28
RNF4-210ENST00000508235 ACTN1P12814 892 aa16.78■□□□□ 0.28
RNF4-210ENST00000508235 XRCC6P12956 609 aaKnown RBP eCLIP16.78■□□□□ 0.28
RNF4-210ENST00000508235 RPA1P27694 616 aa16.78■□□□□ 0.28
RNF4-210ENST00000508235 SF3A1Q15459 793 aaKnown RBP16.78■□□□□ 0.28
RNF4-210ENST00000508235 MTERF2Q49AM1 385 aa16.78■□□□□ 0.28
RNF4-210ENST00000508235 ANO5Q75V66 913 aa16.78■□□□□ 0.28
RNF4-210ENST00000508235 METTL13Q8N6R0 699 aa16.78■□□□□ 0.28
RNF4-210ENST00000508235 IGSF22Q8N9C0 903 aa16.78■□□□□ 0.28
RNF4-210ENST00000508235 CEP170P1Q96L14 293 aa16.78■□□□□ 0.28
RNF4-210ENST00000508235 FAM49AQ9H0Q0 323 aaPredicted RBP16.78■□□□□ 0.28
RNF4-210ENST00000508235 CYP26B1Q9NR63 512 aa16.78■□□□□ 0.28
RNF4-210ENST00000508235 ANKEF1Q9NU02 776 aa16.78■□□□□ 0.28
RNF4-210ENST00000508235 LOXHD1Q8IVV2 1947 aa16.78■□□□□ 0.28
RNF4-210ENST00000508235 ARID2Q68CP9 1835 aa16.77■□□□□ 0.28
RNF4-210ENST00000508235 RFC5P40937 340 aa16.77■□□□□ 0.28
RNF4-210ENST00000508235 DNM2P50570 870 aa16.77■□□□□ 0.28
RNF4-210ENST00000508235 KRT79Q5XKE5 535 aa16.77■□□□□ 0.28
RNF4-210ENST00000508235 EFCAB12Q6NXP0 572 aa16.77■□□□□ 0.28
RNF4-210ENST00000508235 TRAF7Q6Q0C0 670 aa16.77■□□□□ 0.28
RNF4-210ENST00000508235 DEFB128Q7Z7B8 93 aa16.77■□□□□ 0.28
RNF4-210ENST00000508235 CATSPER3Q86XQ3 398 aa16.77■□□□□ 0.28
RNF4-210ENST00000508235 SLC7A3Q8WY07 619 aa16.77■□□□□ 0.28
RNF4-210ENST00000508235 CCDC43Q96MW1 224 aaKnown RBP16.77■□□□□ 0.28
RNF4-210ENST00000508235 ZNF396Q96N95 335 aaPredicted RBP16.77■□□□□ 0.28
RNF4-210ENST00000508235 MAP7D2Q96T17 732 aa16.77■□□□□ 0.28
RNF4-210ENST00000508235 FTOQ9C0B1 505 aaKnown RBP eCLIP16.77■□□□□ 0.28
RNF4-210ENST00000508235 PCDH10Q9P2E7 1040 aa16.77■□□□□ 0.28
RNF4-210ENST00000508235 WRAP73Q9P2S5 460 aaPredicted RBP16.77■□□□□ 0.28
RNF4-210ENST00000508235 GAS2O43903 313 aaKnown RBP16.76■□□□□ 0.27
RNF4-210ENST00000508235 F13A1P00488 732 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 CTSHP09668 335 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 SPATA31C1P0DKV0 1188 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 ACRP10323 421 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 CCT6AP40227 531 aaKnown RBP16.76■□□□□ 0.27
RNF4-210ENST00000508235 EPHB4P54760 987 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 MRPS6P82932 125 aaKnown RBP16.76■□□□□ 0.27
RNF4-210ENST00000508235 SHHQ15465 462 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 XKR9Q5GH70 373 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 TMEM240Q5SV17 173 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 PLA2G4FQ68DD2 849 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 ZNF365Q70YC5 407 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 RNPC3Q96LT9 517 aaKnown RBP16.76■□□□□ 0.27
RNF4-210ENST00000508235 AK8Q96MA6 479 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 NACC1Q96RE7 527 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 SUGCTQ9HAC7 445 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 TRPV2Q9Y5S1 764 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 CEP290O15078 2479 aa16.76■□□□□ 0.27
RNF4-210ENST00000508235 KDM3AQ9Y4C1 1321 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 VWA3AA6NCI4 1184 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 NBNO60934 754 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 MAFO75444 373 aaPredicted RBP16.75■□□□□ 0.27
RNF4-210ENST00000508235 MED24O75448 989 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 CHRNA1P02708 482 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 CXCL10P02778 98 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 POLGP54098 1239 aaPredicted RBP16.75■□□□□ 0.27
RNF4-210ENST00000508235 CDC42EP1Q00587 391 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 ATL3Q6DD88 541 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 FAM43BQ6ZT52 329 aaPredicted RBP16.75■□□□□ 0.27
RNF4-210ENST00000508235 C16orf59Q7L2K0 433 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 KIAA0319LQ8IZA0 1049 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 KCTD17Q8N5Z5 321 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 USP38Q8NB14 1042 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 SNX29Q8TEQ0 813 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 HERVK_113Q902F9 699 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 ZBTB10Q96DT7 871 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.75■□□□□ 0.273e-7■■■□□ 16.9
RNF4-210ENST00000508235 CELF4Q9BZC1 486 aaKnown RBP16.75■□□□□ 0.27
RNF4-210ENST00000508235 CLIC4Q9Y696 253 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 CDY2AQ9Y6F7 541 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 SQORQ9Y6N5 450 aa16.75■□□□□ 0.27
RNF4-210ENST00000508235 MORC2Q9Y6X9 1032 aaPredicted RBP16.75■□□□□ 0.27
RNF4-210ENST00000508235 IGKV6-21A0A0C4DH24 114 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 TMEM150BA6NC51 233 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 SLC26A4O43511 780 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 EFCAB14O75071 495 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 BAIAP3O94812 1187 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 LONP1P36776 959 aaKnown RBP16.74■□□□□ 0.27
RNF4-210ENST00000508235 CLCN3P51790 818 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 MGAT3Q09327 533 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 IL17AQ16552 155 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 ODR4Q5SWX8 454 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 CNKSR3Q6P9H4 555 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 SEPT8Q92599 483 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 APBB2Q92870 758 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 CEP89Q96ST8 783 aa16.74■□□□□ 0.27
RNF4-210ENST00000508235 NT5C3AQ9H0P0 336 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms