RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 PLEKP08567 350 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 FCER1AP12319 257 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 HSPA6P17066 643 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 ERCC3P19447 782 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 HIBADHP31937 336 aaKnown RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 CXCR5P32302 372 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 GYG1P46976 350 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 GUCY2FP51841 1108 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 PPP2R2AP63151 447 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 GUCY1A3Q02108 690 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 EHHADHQ08426 723 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 IFT88Q13099 833 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 RAPGEF1Q13905 1077 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 EDRF1Q3B7T1 1238 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 PREPLQ4J6C6 727 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 TMEM119Q4V9L6 283 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 FAM47AQ5JRC9 791 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 C12orf60Q5U649 245 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 HGSNATQ68CP4 663 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 KCNV1Q6PIU1 500 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 LRRC55Q6ZSA7 311 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 CPLX4Q7Z7G2 160 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 DZIP1Q86YF9 867 aaKnown RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 TEX2Q8IWB9 1127 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCDC13Q8IYE1 715 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 STAG2Q8N3U4 1231 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 SH2D3CQ8N5H7 860 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZNF511Q8NB15 262 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 ARMC2Q8NEN0 867 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 WDR66Q8TBY9 1149 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCHCR1Q8TD31 782 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 RASGRP4Q8TDF6 673 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 DDX17Q92841 729 aaKnown RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 MTMR8Q96EF0 704 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 SGSM3Q96HU1 749 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 FAM84BQ96KN1 310 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 RUNDC3BQ96NL0 473 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 INPP4AQ96PE3 977 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 PLIN2Q99541 437 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 PLCD4Q9BRC7 762 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 FAM129AQ9BZQ8 928 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 METTL14Q9HCE5 456 aaKnown RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 DONSONQ9NYP3 566 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 MAP10Q9P2G4 905 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 SUCLA2Q9P2R7 463 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 PARP2Q9UGN5 583 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 RASAL2Q9UJF2 1139 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 TMEM59LQ9UK28 342 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 NIP7Q9Y221 180 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 UTP11Q9Y3A2 253 aaKnown RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 CACNA1SQ13698 1873 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 LOC102724159A0A0B4J2E5 919 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 MYMKA6NI61 221 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCDC169A6NNP5 214 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 KRIT1O00522 736 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 KCNK3O14649 394 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 RAD51CO43502 376 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 PPP1R12BO60237 982 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 CEP104O60308 925 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 NMT2O60551 498 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 RASSF9O75901 435 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 DNAJC8O75937 253 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 CAMTA2O94983 1202 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 FTCDO95954 541 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 ALDH1A1P00352 501 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 FAM153BP0C7A2 387 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 FERP16591 822 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 SMPD1P17405 629 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 RPL13P26373 211 aaKnown RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 VARSP26640 1264 aaKnown RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 KLRC1P26715 233 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 HPDP32754 393 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 HSD17B3P37058 310 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 PRKCIP41743 596 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 TECP42680 631 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 TXKP42681 527 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 CRKLP46109 303 aaKnown RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 ADCY7P51828 1080 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 POLR2FP61218 127 aaKnown RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 HDLBPQ00341 1268 aaKnown RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 GRB10Q13322 594 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 BYSLQ13895 437 aaKnown RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 ITIH4Q14624 930 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 PWP2Q15269 919 aaKnown RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 CTC1Q2NKJ3 1217 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 FAM153CQ494X1 144 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 ASPRV1Q53RT3 343 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 FAM26FQ5R3K3 315 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 WLSQ5T9L3 541 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 MSL1Q68DK7 614 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZNF787Q6DD87 383 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 TTC19Q6DKK2 380 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 C6orf89Q6UWU4 347 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 BRINP3Q76B58 766 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 PEX26Q7Z412 305 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 FRMD5Q7Z6J6 570 aa5.41□□□□□ -1.54
HMGB3P16-201ENST00000508037 TRIM59Q8IWR1 403 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms