RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 CHRNA1P02708 482 aa17.56■□□□□ 0.4
COL1A1-211ENST00000507689 P4HBP07237 508 aaKnown RBP17.56■□□□□ 0.4
COL1A1-211ENST00000507689 QARSP47897 775 aaKnown RBP17.56■□□□□ 0.4
COL1A1-211ENST00000507689 TMEM62Q0P6H9 643 aa17.56■□□□□ 0.4
COL1A1-211ENST00000507689 MBTPS1Q14703 1052 aa17.56■□□□□ 0.4
COL1A1-211ENST00000507689 TSHZ1Q6ZSZ6 1077 aa17.56■□□□□ 0.4
COL1A1-211ENST00000507689 FAM43BQ6ZT52 329 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-211ENST00000507689 EXOC8Q8IYI6 725 aa17.56■□□□□ 0.4
COL1A1-211ENST00000507689 MYOCDQ8IZQ8 938 aa17.56■□□□□ 0.4
COL1A1-211ENST00000507689 TNFRSF25Q93038 417 aa17.56■□□□□ 0.4
COL1A1-211ENST00000507689 VWCEQ96DN2 955 aa17.56■□□□□ 0.4
COL1A1-211ENST00000507689 CCDC43Q96MW1 224 aaKnown RBP17.56■□□□□ 0.4
COL1A1-211ENST00000507689 CELF4Q9BZC1 486 aaKnown RBP17.56■□□□□ 0.4
COL1A1-211ENST00000507689 AKT3Q9Y243 479 aa17.56■□□□□ 0.4
COL1A1-211ENST00000507689 STXBP5LQ9Y2K9 1186 aa17.56■□□□□ 0.4
COL1A1-211ENST00000507689 FAM205CA6NFA0 338 aa17.55■□□□□ 0.4
COL1A1-211ENST00000507689 ATP4AP20648 1035 aa17.55■□□□□ 0.4
COL1A1-211ENST00000507689 MCM7P33993 719 aa17.55■□□□□ 0.4
COL1A1-211ENST00000507689 PAK2Q13177 524 aa17.55■□□□□ 0.4
COL1A1-211ENST00000507689 ORC2Q13416 577 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-211ENST00000507689 GPNMBQ14956 572 aa17.55■□□□□ 0.4
COL1A1-211ENST00000507689 EARS2Q5JPH6 523 aaKnown RBP17.55■□□□□ 0.4
COL1A1-211ENST00000507689 MCTP1Q6DN14 999 aa17.55■□□□□ 0.4
COL1A1-211ENST00000507689 EFCAB12Q6NXP0 572 aa17.55■□□□□ 0.4
COL1A1-211ENST00000507689 OTUD6AQ7L8S5 288 aa17.55■□□□□ 0.4
COL1A1-211ENST00000507689 NOSTRINQ8IVI9 506 aa17.55■□□□□ 0.4
COL1A1-211ENST00000507689 BANK1Q8NDB2 785 aa17.55■□□□□ 0.4
COL1A1-211ENST00000507689 FTHL17Q9BXU8 183 aa17.55■□□□□ 0.4
COL1A1-211ENST00000507689 SUGCTQ9HAC7 445 aa17.55■□□□□ 0.4
COL1A1-211ENST00000507689 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-211ENST00000507689 C22orf31O95567 290 aa17.54■□□□□ 0.4
COL1A1-211ENST00000507689 FOSL2P15408 326 aa17.54■□□□□ 0.4
COL1A1-211ENST00000507689 TXKP42681 527 aa17.54■□□□□ 0.4
COL1A1-211ENST00000507689 TRAPPC10P48553 1259 aa17.54■□□□□ 0.4
COL1A1-211ENST00000507689 CDC42EP1Q00587 391 aa17.54■□□□□ 0.4
COL1A1-211ENST00000507689 EPHA7Q15375 998 aa17.54■□□□□ 0.4
COL1A1-211ENST00000507689 MTERF2Q49AM1 385 aa17.54■□□□□ 0.4
COL1A1-211ENST00000507689 FBXO47Q5MNV8 452 aa17.54■□□□□ 0.4
COL1A1-211ENST00000507689 FAM117BQ6P1L5 589 aa17.54■□□□□ 0.4
COL1A1-211ENST00000507689 ZBTB10Q96DT7 871 aa17.54■□□□□ 0.4
COL1A1-211ENST00000507689 CDX2Q99626 313 aaPredicted RBP17.54■□□□□ 0.4
COL1A1-211ENST00000507689 RAD9AQ99638 391 aa17.54■□□□□ 0.4
COL1A1-211ENST00000507689 TTYH1Q9H313 450 aaPredicted RBP17.54■□□□□ 0.4
COL1A1-211ENST00000507689 TTC12Q9H892 705 aaPredicted RBP17.54■□□□□ 0.4
COL1A1-211ENST00000507689 CA3P07451 260 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 DEFB103AP81534 67 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 MGAT3Q09327 533 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 LPIN1Q14693 890 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 UGCGQ16739 394 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 TMEM266Q2M3C6 531 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 KIAA0319LQ8IZA0 1049 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 ERMNQ8TAM6 284 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 NEK9Q8TD19 979 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 SLC7A3Q8WY07 619 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 HAS1Q92839 578 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 NIFKQ9BYG3 293 aaKnown RBP17.53■□□□□ 0.4
COL1A1-211ENST00000507689 ZSWIM4Q9H7M6 989 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 VAV3Q9UKW4 847 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 YBX2Q9Y2T7 364 aaKnown RBP17.53■□□□□ 0.4
COL1A1-211ENST00000507689 PPME1Q9Y570 386 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 INSL6Q9Y581 213 aa17.53■□□□□ 0.4
COL1A1-211ENST00000507689 MYH9P35579 1960 aaKnown RBP17.53■□□□□ 0.4
COL1A1-211ENST00000507689 KDM3AQ9Y4C1 1321 aa17.52■□□□□ 0.4
COL1A1-211ENST00000507689 GPR182O15218 404 aa17.52■□□□□ 0.4
COL1A1-211ENST00000507689 ZNF862O60290 1169 aa17.52■□□□□ 0.4
COL1A1-211ENST00000507689 RPS6KA5O75582 802 aa17.52■□□□□ 0.4
COL1A1-211ENST00000507689 UPP2O95045 317 aa17.52■□□□□ 0.4
COL1A1-211ENST00000507689 GJB5O95377 273 aa17.52■□□□□ 0.4
COL1A1-211ENST00000507689 GJB2P29033 226 aa17.52■□□□□ 0.4
COL1A1-211ENST00000507689 CRYBB1P53674 252 aaPredicted RBP17.52■□□□□ 0.4
COL1A1-211ENST00000507689 NFX1Q12986 1120 aaKnown RBP17.52■□□□□ 0.4
COL1A1-211ENST00000507689 TTC38Q5R3I4 469 aa17.52■□□□□ 0.4
COL1A1-211ENST00000507689 B3GNT9Q6UX72 402 aa17.52■□□□□ 0.4
COL1A1-211ENST00000507689 TPH2Q8IWU9 490 aa17.52■□□□□ 0.4
COL1A1-211ENST00000507689 YME1L1Q96TA2 773 aa17.52■□□□□ 0.4
COL1A1-211ENST00000507689 ZBTB42B2RXF5 422 aa17.51■□□□□ 0.39
COL1A1-211ENST00000507689 EML1O00423 815 aa17.51■□□□□ 0.39
COL1A1-211ENST00000507689 MYOGP15173 224 aa17.51■□□□□ 0.39
COL1A1-211ENST00000507689 CD52P31358 61 aa17.51■□□□□ 0.39
COL1A1-211ENST00000507689 CLCN3P51790 818 aa17.51■□□□□ 0.39
COL1A1-211ENST00000507689 GRIN2CQ14957 1233 aa17.51■□□□□ 0.39
COL1A1-211ENST00000507689 ZNF174Q15697 407 aa17.51■□□□□ 0.39
COL1A1-211ENST00000507689 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL1A1-211ENST00000507689 MYLIPQ8WY64 445 aa17.51■□□□□ 0.39
COL1A1-211ENST00000507689 CEP170P1Q96L14 293 aa17.51■□□□□ 0.39
COL1A1-211ENST00000507689 GUCD1Q96NT3 240 aa17.51■□□□□ 0.39
COL1A1-211ENST00000507689 LXNQ9BS40 222 aa17.51■□□□□ 0.39
COL1A1-211ENST00000507689 RAB34Q9BZG1 259 aa17.51■□□□□ 0.39
COL1A1-211ENST00000507689 DENND3A2RUS2 1198 aa17.5■□□□□ 0.39
COL1A1-211ENST00000507689 VTNP04004 478 aa17.5■□□□□ 0.39
COL1A1-211ENST00000507689 OR52Z1P0C646 297 aa17.5■□□□□ 0.39
COL1A1-211ENST00000507689 STAG3L1P0CL83 205 aa17.5■□□□□ 0.39
COL1A1-211ENST00000507689 POLGP54098 1239 aaPredicted RBP17.5■□□□□ 0.39
COL1A1-211ENST00000507689 NLRP11P59045 1033 aaKnown RBP17.5■□□□□ 0.39
COL1A1-211ENST00000507689 KIZQ2M2Z5 673 aa17.5■□□□□ 0.39
COL1A1-211ENST00000507689 LARP1BQ659C4 914 aaKnown RBP17.5■□□□□ 0.39
COL1A1-211ENST00000507689 C4orf19Q8IY42 314 aa17.5■□□□□ 0.39
COL1A1-211ENST00000507689 LRRC71Q8N4P6 559 aa17.5■□□□□ 0.39
COL1A1-211ENST00000507689 NLRP7Q8WX94 980 aa17.5■□□□□ 0.39
COL1A1-211ENST00000507689 DYDC2Q96IM9 177 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms