RNA–Protein interactions for RNA: ENST00000507655.5

SSBP2-208, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-208ENST00000507655 SEPT8Q92599 483 aa20.28■□□□□ 0.84
SSBP2-208ENST00000507655 TIFAQ96CG3 184 aa20.28■□□□□ 0.84
SSBP2-208ENST00000507655 MTMR9Q96QG7 549 aa20.28■□□□□ 0.84
SSBP2-208ENST00000507655 YBX2Q9Y2T7 364 aaKnown RBP20.28■□□□□ 0.84
SSBP2-208ENST00000507655 PCDHA11Q9Y5I1 949 aa20.28■□□□□ 0.84
SSBP2-208ENST00000507655 SQORQ9Y6N5 450 aa20.28■□□□□ 0.84
SSBP2-208ENST00000507655 NLRC5Q86WI3 1866 aa20.28■□□□□ 0.84
SSBP2-208ENST00000507655 CHD9Q3L8U1 2897 aa20.28■□□□□ 0.84
SSBP2-208ENST00000507655 KDM3AQ9Y4C1 1321 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 MAGEB2O15479 319 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 KCNJ6P48051 423 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 RABGGTBP53611 331 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 PSMC5P62195 406 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 DEFB103AP81534 67 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 ORC2Q13416 577 aaPredicted RBP20.27■□□□□ 0.84
SSBP2-208ENST00000507655 LPIN1Q14693 890 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 TARBP2Q15633 366 aaKnown RBP20.27■□□□□ 0.84
SSBP2-208ENST00000507655 FBXO47Q5MNV8 452 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 LINC01465Q8N7H1 131 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 BANK1Q8NDB2 785 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 APBB2Q92870 758 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 NIFKQ9BYG3 293 aaKnown RBP20.27■□□□□ 0.84
SSBP2-208ENST00000507655 MSRAQ9UJ68 235 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 PCDHA12Q9UN75 941 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.27■□□□□ 0.84
SSBP2-208ENST00000507655 TRPV2Q9Y5S1 764 aa20.27■□□□□ 0.84
SSBP2-208ENST00000507655 P4HBP07237 508 aaKnown RBP20.26■□□□□ 0.83
SSBP2-208ENST00000507655 GHRP10912 638 aa20.26■□□□□ 0.83
SSBP2-208ENST00000507655 TRAPPC10P48553 1259 aa20.26■□□□□ 0.83
SSBP2-208ENST00000507655 TMEM62Q0P6H9 643 aa20.26■□□□□ 0.83
SSBP2-208ENST00000507655 CUL4AQ13619 759 aa20.26■□□□□ 0.83
SSBP2-208ENST00000507655 GNL2Q13823 731 aaKnown RBP20.26■□□□□ 0.83
SSBP2-208ENST00000507655 EPHA7Q15375 998 aa20.26■□□□□ 0.83
SSBP2-208ENST00000507655 XKR3Q5GH77 459 aa20.26■□□□□ 0.83
SSBP2-208ENST00000507655 HERC6Q8IVU3 1022 aa20.26■□□□□ 0.83
SSBP2-208ENST00000507655 FAM161BQ96MY7 647 aa20.26■□□□□ 0.83
SSBP2-208ENST00000507655 GUCD1Q96NT3 240 aa20.26■□□□□ 0.83
SSBP2-208ENST00000507655 CEP89Q96ST8 783 aa20.26■□□□□ 0.83
SSBP2-208ENST00000507655 IFIH1Q9BYX4 1025 aaKnown RBP20.26■□□□□ 0.83
SSBP2-208ENST00000507655 CELF4Q9BZC1 486 aaKnown RBP20.26■□□□□ 0.83
SSBP2-208ENST00000507655 TMEM60Q9H2L4 133 aa20.26■□□□□ 0.83
SSBP2-208ENST00000507655 COL6A3P12111 3177 aa20.26■□□□□ 0.83
SSBP2-208ENST00000507655 CHD7Q9P2D1 2997 aa20.25■□□□□ 0.83
SSBP2-208ENST00000507655 M0QZ92 97 aa20.25■□□□□ 0.83
SSBP2-208ENST00000507655 ATP2B1P20020 1258 aa20.25■□□□□ 0.83
SSBP2-208ENST00000507655 MCM7P33993 719 aa20.25■□□□□ 0.83
SSBP2-208ENST00000507655 QARSP47897 775 aaKnown RBP20.25■□□□□ 0.83
SSBP2-208ENST00000507655 NCAPH2Q6IBW4 605 aa20.25■□□□□ 0.83
SSBP2-208ENST00000507655 TSHZ1Q6ZSZ6 1077 aa20.25■□□□□ 0.83
SSBP2-208ENST00000507655 USP38Q8NB14 1042 aa20.25■□□□□ 0.83
SSBP2-208ENST00000507655 ZNF576Q9H609 170 aa20.25■□□□□ 0.83
SSBP2-208ENST00000507655 TTC12Q9H892 705 aaPredicted RBP20.25■□□□□ 0.83
SSBP2-208ENST00000507655 SEPT9Q9UHD8 586 aaPredicted RBP20.25■□□□□ 0.83
SSBP2-208ENST00000507655 SMC3Q9UQE7 1217 aa20.25■□□□□ 0.83
SSBP2-208ENST00000507655 DKC1O60832 514 aaKnown RBP eCLIP20.24■□□□□ 0.83
SSBP2-208ENST00000507655 MYOGP15173 224 aa20.24■□□□□ 0.83
SSBP2-208ENST00000507655 TTC38Q5R3I4 469 aa20.24■□□□□ 0.83
SSBP2-208ENST00000507655 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.24■□□□□ 0.831e-8■■■■□ 21.4
SSBP2-208ENST00000507655 METTL13Q8N6R0 699 aa20.24■□□□□ 0.83
SSBP2-208ENST00000507655 NKX2-4Q9H2Z4 354 aa20.24■□□□□ 0.83
SSBP2-208ENST00000507655 AGO3Q9H9G7 860 aaKnown RBP20.24■□□□□ 0.83
SSBP2-208ENST00000507655 WRAP73Q9P2S5 460 aaPredicted RBP20.24■□□□□ 0.83
SSBP2-208ENST00000507655 RALGAPA2Q2PPJ7 1873 aa20.24■□□□□ 0.83
SSBP2-208ENST00000507655 TMEM150BA6NC51 233 aa20.23■□□□□ 0.83
SSBP2-208ENST00000507655 TXKP42681 527 aa20.23■□□□□ 0.83
SSBP2-208ENST00000507655 MTERF2Q49AM1 385 aa20.23■□□□□ 0.83
SSBP2-208ENST00000507655 EFCAB12Q6NXP0 572 aa20.23■□□□□ 0.83
SSBP2-208ENST00000507655 ANO5Q75V66 913 aa20.23■□□□□ 0.83
SSBP2-208ENST00000507655 C4orf19Q8IY42 314 aa20.23■□□□□ 0.83
SSBP2-208ENST00000507655 LXNQ9BS40 222 aa20.23■□□□□ 0.83
SSBP2-208ENST00000507655 RGL1Q9NZL6 768 aa20.23■□□□□ 0.83
SSBP2-208ENST00000507655 NOL7Q9UMY1 257 aaKnown RBP20.23■□□□□ 0.83
SSBP2-208ENST00000507655 IGKV6-21A0A0C4DH24 114 aa20.22■□□□□ 0.83
SSBP2-208ENST00000507655 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.22■□□□□ 0.83
SSBP2-208ENST00000507655 DDX11L8A8MPP1 907 aa20.22■□□□□ 0.83
SSBP2-208ENST00000507655 GPR32O75388 356 aa20.22■□□□□ 0.83
SSBP2-208ENST00000507655 GJB5O95377 273 aa20.22■□□□□ 0.83
SSBP2-208ENST00000507655 AMHP03971 560 aa20.22■□□□□ 0.83
SSBP2-208ENST00000507655 TOB1P50616 345 aaPredicted RBP20.22■□□□□ 0.83
SSBP2-208ENST00000507655 CLCN3P51790 818 aa20.22■□□□□ 0.83
SSBP2-208ENST00000507655 TBC1D8BQ0IIM8 1120 aa20.22■□□□□ 0.83
SSBP2-208ENST00000507655 ZNF174Q15697 407 aa20.22■□□□□ 0.83
SSBP2-208ENST00000507655 TMCO2Q7Z6W1 182 aaPredicted RBP20.22■□□□□ 0.83
SSBP2-208ENST00000507655 LRRC71Q8N4P6 559 aa20.22■□□□□ 0.83
SSBP2-208ENST00000507655 DYDC2Q96IM9 177 aa20.22■□□□□ 0.83
SSBP2-208ENST00000507655 SLC28A3Q9HAS3 691 aa20.22■□□□□ 0.83
SSBP2-208ENST00000507655 CDHR5Q9HBB8 845 aa20.22■□□□□ 0.83
SSBP2-208ENST00000507655 FNDC1Q4ZHG4 1894 aaPredicted RBP20.22■□□□□ 0.83
SSBP2-208ENST00000507655 SLITRK3O94933 977 aa20.21■□□□□ 0.83
SSBP2-208ENST00000507655 VTNP04004 478 aa20.21■□□□□ 0.83
SSBP2-208ENST00000507655 TMOD1P28289 359 aa20.21■□□□□ 0.83
SSBP2-208ENST00000507655 CD52P31358 61 aa20.21■□□□□ 0.83
SSBP2-208ENST00000507655 GRIN2CQ14957 1233 aa20.21■□□□□ 0.83
SSBP2-208ENST00000507655 ZNF710Q8N1W2 664 aa20.21■□□□□ 0.83
SSBP2-208ENST00000507655 NEK9Q8TD19 979 aa20.21■□□□□ 0.83
SSBP2-208ENST00000507655 MAP7D2Q96T17 732 aa20.21■□□□□ 0.83
SSBP2-208ENST00000507655 CDX2Q99626 313 aaPredicted RBP20.21■□□□□ 0.83
SSBP2-208ENST00000507655 HSD17B14Q9BPX1 270 aa20.21■□□□□ 0.83
SSBP2-208ENST00000507655 EIF2AK1Q9BQI3 630 aaKnown RBP20.21■□□□□ 0.83
SSBP2-208ENST00000507655 ZSWIM4Q9H7M6 989 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms