RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ADALQ6DHV7 355 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 NCAPH2Q6IBW4 605 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 FERMT3Q86UX7 667 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 ZNF410Q86VK4 478 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 CKAP2LQ8IYA6 745 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 TMEM199Q8N511 208 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 DIS3LQ8TF46 1054 aaKnown RBP9.45□□□□□ -0.9
PDGFC-205ENST00000506880 LMBR1Q8WVP7 490 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 APBB2Q92870 758 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 CDK5RAP3Q96JB5 506 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 CCDC43Q96MW1 224 aaKnown RBP9.45□□□□□ -0.9
PDGFC-205ENST00000506880 MAP7D2Q96T17 732 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 NFKBIZQ9BYH8 718 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 GTPBP4Q9BZE4 634 aaKnown RBP9.45□□□□□ -0.9
PDGFC-205ENST00000506880 MTIF3Q9H2K0 278 aaKnown RBP9.45□□□□□ -0.9
PDGFC-205ENST00000506880 RNPEPQ9H4A4 650 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 DHX33Q9H6R0 707 aaKnown RBP9.45□□□□□ -0.9
PDGFC-205ENST00000506880 CYP26B1Q9NR63 512 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 HDAC6Q9UBN7 1215 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 TRPC6Q9Y210 931 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 RBM19Q9Y4C8 960 aaKnown RBP9.45□□□□□ -0.9
PDGFC-205ENST00000506880 DDX49Q9Y6V7 483 aaKnown RBP9.45□□□□□ -0.9
PDGFC-205ENST00000506880 LTBP2Q14767 1821 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 FAM237AA0A1B0GTK4 181 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 A0A1W2PQ27 194 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 A0A1W2PQ64 194 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 A0A1W2PQD8 194 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 CARNS1A5YM72 827 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 H0YCG3 227 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 EML1O00423 815 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 ZNF862O60290 1169 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 B4GALT4O60513 344 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 MAFO75444 373 aaPredicted RBP9.44□□□□□ -0.9
PDGFC-205ENST00000506880 EYA4O95677 639 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 MYCP01106 439 aaPredicted RBP9.44□□□□□ -0.9
PDGFC-205ENST00000506880 SPATA31C1P0DKV0 1188 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 INSRRP14616 1297 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 SELPP16109 830 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 ATP2B1P20020 1258 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 AMPD3Q01432 767 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 FAAP100Q0VG06 881 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 PPP2R5AQ15172 486 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 TRIM60Q495X7 471 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 TMEM63BQ5T3F8 832 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 MFSD5Q6N075 450 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 CNNM4Q6P4Q7 775 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 CATSPER3Q86XQ3 398 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 KIFAP3Q92845 792 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 USP28Q96RU2 1077 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 LBHD1Q9BQE6 289 aaPredicted RBP9.44□□□□□ -0.9
PDGFC-205ENST00000506880 PDLIM7Q9NR12 457 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 TMEM39AQ9NV64 488 aa9.44□□□□□ -0.9
PDGFC-205ENST00000506880 FBXO2Q9UK22 296 aaPredicted RBP9.44□□□□□ -0.9
PDGFC-205ENST00000506880 VWA3AA6NCI4 1184 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 POTEMA6NI47 508 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 DDX39AO00148 427 aaKnown RBP9.43□□□□□ -0.9
PDGFC-205ENST00000506880 CHMP2AO43633 222 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 BAIAP3O94812 1187 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 STBD1O95210 358 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 C22orf31O95567 290 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 ATP4AP20648 1035 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 CMA1P23946 247 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 GUCY2CP25092 1073 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 CCT6AP40227 531 aaKnown RBP9.43□□□□□ -0.9
PDGFC-205ENST00000506880 RARRES1P49788 294 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 TMEM119Q4V9L6 283 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 FAM47CQ5HY64 1035 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 GDF6Q6KF10 455 aaPredicted RBP9.43□□□□□ -0.9
PDGFC-205ENST00000506880 KANK3Q6NY19 840 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 PSRC1Q6PGN9 363 aaPredicted RBP9.43□□□□□ -0.9
PDGFC-205ENST00000506880 MTHFD1LQ6UB35 978 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 ANO5Q75V66 913 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 IFNLR1Q8IU57 520 aaPredicted RBP9.43□□□□□ -0.9
PDGFC-205ENST00000506880 TPH2Q8IWU9 490 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 ELOA2Q8IYF1 753 aaPredicted RBP9.43□□□□□ -0.9
PDGFC-205ENST00000506880 LINC01465Q8N7H1 131 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 DPF3Q92784 378 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 SPATA32Q96LK8 384 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 DRC1Q96MC2 740 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 CEP89Q96ST8 783 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 NOC4LQ9BVI4 516 aaKnown RBP9.43□□□□□ -0.9
PDGFC-205ENST00000506880 FTHL17Q9BXU8 183 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 HIPK3Q9H422 1215 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 ATP6V0A4Q9HBG4 840 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 FAM13BQ9NYF5 915 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 PKD2L1Q9P0L9 805 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 ODF2LQ9ULJ1 636 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 ATP11BQ9Y2G3 1177 aa9.43□□□□□ -0.9
PDGFC-205ENST00000506880 ZMYM2Q9UBW7 1377 aa9.42□□□□□ -0.9
PDGFC-205ENST00000506880 ZBTB42B2RXF5 422 aa9.42□□□□□ -0.9
PDGFC-205ENST00000506880 WNT7AO00755 349 aa9.42□□□□□ -0.9
PDGFC-205ENST00000506880 PQBP1O60828 265 aaKnown RBP9.42□□□□□ -0.9
PDGFC-205ENST00000506880 CXCL10P02778 98 aa9.42□□□□□ -0.9
PDGFC-205ENST00000506880 ACTN1P12814 892 aa9.42□□□□□ -0.9
PDGFC-205ENST00000506880 RAG1P15918 1043 aa9.42□□□□□ -0.9
PDGFC-205ENST00000506880 CYP11B2P19099 503 aa9.42□□□□□ -0.9
PDGFC-205ENST00000506880 KLRC1P26715 233 aa9.42□□□□□ -0.9
PDGFC-205ENST00000506880 POLGP54098 1239 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-205ENST00000506880 SP4Q02446 784 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms