RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 TMEM119Q4V9L6 283 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 ADALQ6DHV7 355 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 SHC4Q6S5L8 630 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 OTUD6AQ7L8S5 288 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 TRMT1LQ7Z2T5 733 aaKnown RBP14.36□□□□□ -0.11
TCOF1-210ENST00000506767 TRAPPC12Q8WVT3 735 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 SYMPKQ92797 1274 aaKnown RBP14.36□□□□□ -0.11
TCOF1-210ENST00000506767 NACC1Q96RE7 527 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 NT5C3AQ9H0P0 336 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 GDPD2Q9HCC8 539 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 SEPT9Q9UHD8 586 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-210ENST00000506767 DBR1Q9UK59 544 aaKnown RBP14.36□□□□□ -0.11
TCOF1-210ENST00000506767 KIAA1024Q9UPX6 916 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 ATP11BQ9Y2G3 1177 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 PPME1Q9Y570 386 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 KDM3AQ9Y4C1 1321 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 ARID2Q68CP9 1835 aa14.36□□□□□ -0.11
TCOF1-210ENST00000506767 A0A087WWV3 80 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 C22orf31O95567 290 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 KLRC1P26715 233 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 RARRES1P49788 294 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 NPEPPSP55786 919 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 IGBP1P78318 339 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 PTK7Q13308 1070 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 PLA2G4FQ68DD2 849 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 MTHFD1LQ6UB35 978 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 CLEC17AQ6ZS10 378 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 SERINC5Q86VE9 423 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 PIGOQ8TEQ8 1089 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 CYP26B1Q9NR63 512 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 DDX19AQ9NUU7 478 aaKnown RBP14.35□□□□□ -0.11
TCOF1-210ENST00000506767 TUBE1Q9UJT0 475 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 PCDHA2Q9Y5H9 948 aa14.35□□□□□ -0.11
TCOF1-210ENST00000506767 IGKV6-21A0A0C4DH24 114 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 E9PMD0 336 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 EYA4O95677 639 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 CLTBP09497 229 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 KARSQ15046 597 aaKnown RBP14.34□□□□□ -0.11
TCOF1-210ENST00000506767 TRIM71Q2Q1W2 868 aaKnown RBP14.34□□□□□ -0.11
TCOF1-210ENST00000506767 MTERF2Q49AM1 385 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 XKR9Q5GH70 373 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 RESP18Q5W5W9 173 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 KCNK18Q7Z418 384 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 LINC01465Q8N7H1 131 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 LRRC15Q8TF66 581 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 DHX38Q92620 1227 aaKnown RBP14.34□□□□□ -0.11
TCOF1-210ENST00000506767 ZBTB10Q96DT7 871 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 CALML4Q96GE6 196 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 CEP170P1Q96L14 293 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 SH2D3AQ9BRG2 576 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 DHX33Q9H6R0 707 aaKnown RBP14.34□□□□□ -0.11
TCOF1-210ENST00000506767 PDLIM7Q9NR12 457 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 TBX21Q9UL17 535 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 LOXHD1Q8IVV2 1947 aa14.34□□□□□ -0.11
TCOF1-210ENST00000506767 SMIM35A0A1B0GVV1 85 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 MAGEB2O15479 319 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 MAFO75444 373 aaPredicted RBP14.33□□□□□ -0.12
TCOF1-210ENST00000506767 CYP2C9P11712 490 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 CMA1P23946 247 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 RBL2Q08999 1139 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 TAF2Q6P1X5 1199 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 RUFY4Q6ZNE9 571 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 SH3RF1Q7Z6J0 888 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 RPAINQ86UA6 219 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 WNT8BQ93098 351 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 BLOC1S4Q9NUP1 217 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 CCDC39Q9UFE4 941 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 DNM3Q9UQ16 869 aa14.33□□□□□ -0.12
TCOF1-210ENST00000506767 DNAH12Q6ZR08 3092 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 A0A087X0B3 334 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 FAM237AA0A1B0GTK4 181 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 A0A1W2PQ27 194 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 A0A1W2PQ64 194 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 A0A1W2PQD8 194 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 TRIM43BA6NCK2 446 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 KIAA0355O15063 1070 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 EVI5O60447 810 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 PLCG1P19174 1290 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 TXLNAP40222 546 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 RFC5P40937 340 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 TBC1D8BQ0IIM8 1120 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 MKRN4PQ13434 485 aaPredicted RBP14.32□□□□□ -0.12
TCOF1-210ENST00000506767 ZRSR1Q15695 479 aaKnown RBP14.32□□□□□ -0.12
TCOF1-210ENST00000506767 EXOC8Q8IYI6 725 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 TMEM87AQ8NBN3 555 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 DPF3Q92784 378 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 TRIM43Q96BQ3 446 aaPredicted RBP14.32□□□□□ -0.12
TCOF1-210ENST00000506767 CDK5RAP3Q96JB5 506 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 PLIN2Q99541 437 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 NOC4LQ9BVI4 516 aaKnown RBP14.32□□□□□ -0.12
TCOF1-210ENST00000506767 BHMT2Q9H2M3 363 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 TMEM39AQ9NV64 488 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 NOD1Q9Y239 953 aa14.32□□□□□ -0.12
TCOF1-210ENST00000506767 EVPLQ92817 2033 aa14.31□□□□□ -0.12
TCOF1-210ENST00000506767 CAND2O75155 1236 aa14.31□□□□□ -0.12
TCOF1-210ENST00000506767 DGAT1O75907 488 aa14.31□□□□□ -0.12
TCOF1-210ENST00000506767 E2F4Q16254 413 aa14.31□□□□□ -0.12
TCOF1-210ENST00000506767 NAALADL2Q58DX5 795 aa14.31□□□□□ -0.12
TCOF1-210ENST00000506767 EFCAB12Q6NXP0 572 aa14.31□□□□□ -0.12
TCOF1-210ENST00000506767 C7orf61Q8IZ16 206 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms