RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 TRAPPC10P48553 1259 aa20.04■□□□□ 0.8
SMN1-204ENST00000506163 PSMC5P62195 406 aa20.04■□□□□ 0.8
SMN1-204ENST00000506163 MRPS6P82932 125 aaKnown RBP20.04■□□□□ 0.8
SMN1-204ENST00000506163 CNKSR3Q6P9H4 555 aa20.04■□□□□ 0.8
SMN1-204ENST00000506163 ZNF579Q8NAF0 562 aaKnown RBP20.04■□□□□ 0.8
SMN1-204ENST00000506163 DYDC2Q96IM9 177 aa20.04■□□□□ 0.8
SMN1-204ENST00000506163 HSD17B14Q9BPX1 270 aa20.04■□□□□ 0.8
SMN1-204ENST00000506163 FOXD4L1Q9NU39 408 aa20.04■□□□□ 0.8
SMN1-204ENST00000506163 SLC4A7Q9Y6M7 1214 aa20.04■□□□□ 0.8
SMN1-204ENST00000506163 SLITRK3O94933 977 aa20.03■□□□□ 0.8
SMN1-204ENST00000506163 P4HBP07237 508 aaKnown RBP20.03■□□□□ 0.8
SMN1-204ENST00000506163 QARSP47897 775 aaKnown RBP20.03■□□□□ 0.8
SMN1-204ENST00000506163 RABGGTBP53611 331 aa20.03■□□□□ 0.8
SMN1-204ENST00000506163 CTTNQ14247 550 aaKnown RBP20.03■□□□□ 0.8
SMN1-204ENST00000506163 LPIN1Q14693 890 aa20.03■□□□□ 0.8
SMN1-204ENST00000506163 XKR3Q5GH77 459 aa20.03■□□□□ 0.8
SMN1-204ENST00000506163 TMCO2Q7Z6W1 182 aaPredicted RBP20.03■□□□□ 0.8
SMN1-204ENST00000506163 PBX4Q9BYU1 374 aa20.03■□□□□ 0.8
SMN1-204ENST00000506163 AGO3Q9H9G7 860 aaKnown RBP20.03■□□□□ 0.8
SMN1-204ENST00000506163 PTPRSQ13332 1948 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 POTEMA6NI47 508 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 DDX11L8A8MPP1 907 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 H3BQV1 296 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 GHRP10912 638 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 ACTN1P12814 892 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 CLCN3P51790 818 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 WDR5P61964 334 aaKnown RBP20.02■□□□□ 0.8
SMN1-204ENST00000506163 CYP4A11Q02928 519 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 FBXO47Q5MNV8 452 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 PLA2G4FQ68DD2 849 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 GPR153Q6NV75 609 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 RSPH3Q86UC2 560 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 NME8Q8N427 588 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 EIF2AK1Q9BQI3 630 aaKnown RBP20.02■□□□□ 0.8
SMN1-204ENST00000506163 LXNQ9BS40 222 aa20.02■□□□□ 0.8
SMN1-204ENST00000506163 OR52Z1P0C646 297 aa20.02■□□□□ 0.79
SMN1-204ENST00000506163 MYOGP15173 224 aa20.02■□□□□ 0.79
SMN1-204ENST00000506163 ATP2A2P16615 1042 aaKnown RBP20.02■□□□□ 0.79
SMN1-204ENST00000506163 NPEPPSP55786 919 aa20.02■□□□□ 0.79
SMN1-204ENST00000506163 DEFB103AP81534 67 aa20.02■□□□□ 0.79
SMN1-204ENST00000506163 DRP2Q13474 957 aa20.02■□□□□ 0.79
SMN1-204ENST00000506163 MTERF2Q49AM1 385 aa20.02■□□□□ 0.79
SMN1-204ENST00000506163 EFCAB12Q6NXP0 572 aa20.02■□□□□ 0.79
SMN1-204ENST00000506163 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.02■□□□□ 0.79
SMN1-204ENST00000506163 LRRC71Q8N4P6 559 aa20.02■□□□□ 0.79
SMN1-204ENST00000506163 METTL13Q8N6R0 699 aa20.02■□□□□ 0.79
SMN1-204ENST00000506163 INTS4Q96HW7 963 aaKnown RBP20.02■□□□□ 0.79
SMN1-204ENST00000506163 CELF4Q9BZC1 486 aaKnown RBP20.02■□□□□ 0.79
SMN1-204ENST00000506163 MTIF3Q9H2K0 278 aaKnown RBP20.02■□□□□ 0.79
SMN1-204ENST00000506163 TTYH1Q9H313 450 aaPredicted RBP20.02■□□□□ 0.79
SMN1-204ENST00000506163 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.02■□□□□ 0.79
SMN1-204ENST00000506163 SEPT9Q9UHD8 586 aaPredicted RBP20.02■□□□□ 0.79
SMN1-204ENST00000506163 NOL7Q9UMY1 257 aaKnown RBP20.02■□□□□ 0.79
SMN1-204ENST00000506163 CEP131Q9UPN4 1083 aa20.02■□□□□ 0.79
SMN1-204ENST00000506163 YBX2Q9Y2T7 364 aaKnown RBP20.02■□□□□ 0.79
SMN1-204ENST00000506163 CHD9Q3L8U1 2897 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 LOXHD1Q8IVV2 1947 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 A0A087WWV3 80 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 ABHD14A-ACY1A0A1B0GW23 586 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 MAGEB2O15479 319 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 BAIAP3O94812 1187 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 VTNP04004 478 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 TECP42680 631 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 PTGDRQ13258 359 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 ORC2Q13416 577 aaPredicted RBP20.01■□□□□ 0.79
SMN1-204ENST00000506163 IL17AQ16552 155 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 TPH2Q8IWU9 490 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 C4orf19Q8IY42 314 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 TMEM40Q8WWA1 233 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 TRPV2Q9Y5S1 764 aa20.01■□□□□ 0.79
SMN1-204ENST00000506163 KDM3AQ9Y4C1 1321 aa20■□□□□ 0.79
SMN1-204ENST00000506163 IGKV6-21A0A0C4DH24 114 aa20■□□□□ 0.79
SMN1-204ENST00000506163 GPR32O75388 356 aa20■□□□□ 0.79
SMN1-204ENST00000506163 SPATA31C1P0DKV0 1188 aa20■□□□□ 0.79
SMN1-204ENST00000506163 DNAJB2P25686 324 aa20■□□□□ 0.79
SMN1-204ENST00000506163 IKBKEQ14164 716 aa20■□□□□ 0.79
SMN1-204ENST00000506163 IER5Q5VY09 327 aa20■□□□□ 0.79
SMN1-204ENST00000506163 PPP1R16BQ96T49 567 aa20■□□□□ 0.79
SMN1-204ENST00000506163 IFIH1Q9BYX4 1025 aaKnown RBP20■□□□□ 0.79
SMN1-204ENST00000506163 SUGCTQ9HAC7 445 aa20■□□□□ 0.79
SMN1-204ENST00000506163 GBF1Q92538 1859 aa19.99■□□□□ 0.79
SMN1-204ENST00000506163 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.99■□□□□ 0.79
SMN1-204ENST00000506163 SYT1P21579 422 aa19.99■□□□□ 0.79
SMN1-204ENST00000506163 CD52P31358 61 aa19.99■□□□□ 0.79
SMN1-204ENST00000506163 TBC1D8BQ0IIM8 1120 aa19.99■□□□□ 0.79
SMN1-204ENST00000506163 DEFB123Q8N688 67 aa19.99■□□□□ 0.79
SMN1-204ENST00000506163 SEPT8Q92599 483 aa19.99■□□□□ 0.79
SMN1-204ENST00000506163 ADAMTS10Q9H324 1103 aa19.99■□□□□ 0.79
SMN1-204ENST00000506163 ZSWIM4Q9H7M6 989 aa19.99■□□□□ 0.79
SMN1-204ENST00000506163 CYP26B1Q9NR63 512 aa19.99■□□□□ 0.79
SMN1-204ENST00000506163 MICAL3Q7RTP6 2002 aa19.99■□□□□ 0.79
SMN1-204ENST00000506163 CDH23Q9H251 3354 aa19.99■□□□□ 0.79
SMN1-204ENST00000506163 LYPLA2O95372 231 aa19.98■□□□□ 0.79
SMN1-204ENST00000506163 RPLP2P05387 115 aaKnown RBP19.98■□□□□ 0.79
SMN1-204ENST00000506163 KIZQ2M2Z5 673 aa19.98■□□□□ 0.79
SMN1-204ENST00000506163 RILPL1Q5EBL4 403 aa19.98■□□□□ 0.79
SMN1-204ENST00000506163 TSHZ1Q6ZSZ6 1077 aa19.98■□□□□ 0.79
SMN1-204ENST00000506163 RTN4RL1Q86UN2 441 aaPredicted RBP19.98■□□□□ 0.79
SMN1-204ENST00000506163 FERMT3Q86UX7 667 aa19.98■□□□□ 0.79
SMN1-204ENST00000506163 HERC6Q8IVU3 1022 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms