RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 REXO1Q8N1G1 1221 aaKnown RBP13.87□□□□□ -0.19
SNHG4-202ENST00000505522 RASGRP4Q8TDF6 673 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 TMEM40Q8WWA1 233 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 PLVAPQ9BX97 442 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 C6orf50Q9HD87 102 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 ERVK-5Q9HDB9 667 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 GINS2Q9Y248 185 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 NOC2LQ9Y3T9 749 aaKnown RBP13.87□□□□□ -0.19
SNHG4-202ENST00000505522 COL1A2P08123 1366 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 FAM86C2PA6NEL3 165 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 EDIL3O43854 480 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 MGEA5O60502 916 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 GPR37L1O60883 481 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 MMP1P03956 469 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 STAG3L1P0CL83 205 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 IBSPP21815 317 aaPredicted RBP13.86□□□□□ -0.19
SNHG4-202ENST00000505522 DNAJB1P25685 340 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 SSTR3P32745 418 aaPredicted RBP13.86□□□□□ -0.19
SNHG4-202ENST00000505522 GTF2F1P35269 517 aaKnown RBP eCLIP13.86□□□□□ -0.19
SNHG4-202ENST00000505522 DLX2Q07687 328 aaPredicted RBP13.86□□□□□ -0.19
SNHG4-202ENST00000505522 NFX1Q12986 1120 aaKnown RBP13.86□□□□□ -0.19
SNHG4-202ENST00000505522 CTC1Q2NKJ3 1217 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 ZNF484Q5JVG2 852 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 TMEM31Q5JXX7 168 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 TRMT1LQ7Z2T5 733 aaKnown RBP13.86□□□□□ -0.19
SNHG4-202ENST00000505522 FBXL16Q8N461 479 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 CCDC12Q8WUD4 166 aaPredicted RBP13.86□□□□□ -0.19
SNHG4-202ENST00000505522 PPP1R16BQ96T49 567 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 AGXT2Q9BYV1 514 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 TBC1D22BQ9NU19 505 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 PLAGL2Q9UPG8 496 aa13.86□□□□□ -0.19
SNHG4-202ENST00000505522 MAFBQ9Y5Q3 323 aaPredicted RBP13.86□□□□□ -0.19
SNHG4-202ENST00000505522 RPS6KA5O75582 802 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 C22orf31O95567 290 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 ITGB1P05556 798 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 SARSP49591 514 aaKnown RBP13.85□□□□□ -0.19
SNHG4-202ENST00000505522 SETQ01105 290 aaPredicted RBP13.85□□□□□ -0.19
SNHG4-202ENST00000505522 PRR16Q569H4 304 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 MCTP2Q6DN12 878 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 ZNF746Q6NUN9 644 aaPredicted RBP13.85□□□□□ -0.19
SNHG4-202ENST00000505522 CKAP2LQ8IYA6 745 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 KLHL23Q8NBE8 558 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 P2RX5Q93086 422 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 LENG9Q96B70 501 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 SLC26A6Q9BXS9 759 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 IGFLR1Q9H665 355 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 NCOA5Q9HCD5 579 aaKnown RBP13.85□□□□□ -0.19
SNHG4-202ENST00000505522 LRFN2Q9ULH4 789 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 ST3GAL5Q9UNP4 418 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 C5orf42Q9H799 3197 aa13.85□□□□□ -0.19
SNHG4-202ENST00000505522 MYO7AQ13402 2215 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 LINC01565O15544 149 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 NCK2O43639 380 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 VTNP04004 478 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 PSAPP07602 524 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 GNA11P29992 359 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 PDIA3P30101 505 aaKnown RBP13.84□□□□□ -0.19
SNHG4-202ENST00000505522 CIITAP33076 1130 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 AKAP17AQ02040 695 aaKnown RBP13.84□□□□□ -0.19
SNHG4-202ENST00000505522 CLUL1Q15846 466 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 KIZQ2M2Z5 673 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 ADGRD2Q7Z7M1 963 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 SMAP1Q8IYB5 467 aaPredicted RBP13.84□□□□□ -0.19
SNHG4-202ENST00000505522 SPPL3Q8TCT6 385 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 BBXQ8WY36 941 aaPredicted RBP13.84□□□□□ -0.19
SNHG4-202ENST00000505522 ADAM2Q99965 735 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 RNF26Q9BY78 433 aaPredicted RBP13.84□□□□□ -0.19
SNHG4-202ENST00000505522 VPS54Q9P1Q0 977 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 GABBR1Q9UBS5 961 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 PCDHB7Q9Y5E2 793 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 PCDHA10Q9Y5I2 948 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 EVPLQ92817 2033 aa13.84□□□□□ -0.19
SNHG4-202ENST00000505522 TBX10O75333 385 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 GPR32O75388 356 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 IFNAR1P17181 557 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 IRS1P35568 1242 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 PLA2G5P39877 138 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 CRYBB1P53674 252 aaPredicted RBP13.83□□□□□ -0.2
SNHG4-202ENST00000505522 EVCP57679 992 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 CCT2P78371 535 aaKnown RBP13.83□□□□□ -0.2
SNHG4-202ENST00000505522 ZP2Q05996 745 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 NAALADL2Q58DX5 795 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 FAM102BQ5T8I3 360 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 FAM228AQ86W67 206 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 METTL13Q8N6R0 699 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 BICD2Q8TD16 824 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 OSMRQ99650 979 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 RGS18Q9NS28 235 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 FAM50BQ9Y247 325 aa13.83□□□□□ -0.2
SNHG4-202ENST00000505522 DENND3A2RUS2 1198 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 C9IYK1 514 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 GPR182O15218 404 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 MSH4O15457 936 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 MBTPS2O43462 519 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 ZNF862O60290 1169 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 PSMA5P28066 241 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 CLCN3P51790 818 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 ADAM15Q13444 863 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 TOB2Q14106 344 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms