RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 SLC37A4O43826 429 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 FXR2P51116 673 aaKnown RBP eCLIP11.03□□□□□ -0.64
NR1I3-220ENST00000505005 GUCY1B3Q02153 619 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 NCBP1Q09161 790 aaKnown RBP11.03□□□□□ -0.64
NR1I3-220ENST00000505005 TMEM240Q5SV17 173 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 KRT79Q5XKE5 535 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 NCAPH2Q6IBW4 605 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 ZNF365Q70YC5 407 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 TRIM50Q86XT4 487 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 HAS1Q92839 578 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 POLR3CQ9BUI4 534 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-220ENST00000505005 NT5C3AQ9H0P0 336 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 BCAS3Q9H6U6 928 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 GJB4Q9NTQ9 266 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 ATP6V1DQ9Y5K8 247 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 TRPV2Q9Y5S1 764 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 PHLPP2Q6ZVD8 1323 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 DDX11L8A8MPP1 907 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 DGAT1O75907 488 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 AMHP03971 560 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 ATP2B1P20020 1258 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 PTGS1P23219 599 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 RPA1P27694 616 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 IGBP1P78318 339 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 MRPS6P82932 125 aaKnown RBP11.02□□□□□ -0.65
NR1I3-220ENST00000505005 PRKCEQ02156 737 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 MXD4Q14582 209 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-220ENST00000505005 SHHQ15465 462 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 TRIM71Q2Q1W2 868 aaKnown RBP11.02□□□□□ -0.65
NR1I3-220ENST00000505005 ZNF618Q5T7W0 954 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 TSHZ1Q6ZSZ6 1077 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 ZNF410Q86VK4 478 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 METTL13Q8N6R0 699 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 ZNF396Q96N95 335 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-220ENST00000505005 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.02□□□□□ -0.65
NR1I3-220ENST00000505005 CELF4Q9BZC1 486 aaKnown RBP11.02□□□□□ -0.65
NR1I3-220ENST00000505005 WNT8AQ9H1J5 351 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 LRWD1Q9UFC0 647 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 SEPT9Q9UHD8 586 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-220ENST00000505005 VAV3Q9UKW4 847 aa11.02□□□□□ -0.65
NR1I3-220ENST00000505005 VPS37CA5D8V6 355 aaPredicted RBP11.01□□□□□ -0.65
NR1I3-220ENST00000505005 ZBBXA8MT70 800 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 STX6O43752 255 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 EDIL3O43854 480 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 MAFO75444 373 aaPredicted RBP11.01□□□□□ -0.65
NR1I3-220ENST00000505005 STAG3L1P0CL83 205 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 SKIP12755 728 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 SCP2P22307 547 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 YWHABP31946 246 aaKnown RBP11.01□□□□□ -0.65
NR1I3-220ENST00000505005 CRYBB1P53674 252 aaPredicted RBP11.01□□□□□ -0.65
NR1I3-220ENST00000505005 POLGP54098 1239 aaPredicted RBP11.01□□□□□ -0.65
NR1I3-220ENST00000505005 POU5F1BQ06416 359 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 PTGDRQ13258 359 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 ZNF174Q15697 407 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 PLEKHG4Q58EX7 1191 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 RASIP1Q5U651 963 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 EFCAB12Q6NXP0 572 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 TPH2Q8IWU9 490 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 MCPH1Q8NEM0 835 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 DNAJB3Q8WWF6 145 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 CEP170P1Q96L14 293 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 HSD17B14Q9BPX1 270 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 EIF2AK1Q9BQI3 630 aaKnown RBP11.01□□□□□ -0.65
NR1I3-220ENST00000505005 LXNQ9BS40 222 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 TIPINQ9BVW5 301 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 IFIH1Q9BYX4 1025 aaKnown RBP11.01□□□□□ -0.65
NR1I3-220ENST00000505005 GCOM2Q9BZD3 368 aaPredicted RBP11.01□□□□□ -0.65
NR1I3-220ENST00000505005 CYP26B1Q9NR63 512 aa11.01□□□□□ -0.65
NR1I3-220ENST00000505005 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.01□□□□□ -0.65
NR1I3-220ENST00000505005 DBR1Q9UK59 544 aaKnown RBP11.01□□□□□ -0.65
NR1I3-220ENST00000505005 MORC2Q9Y6X9 1032 aaPredicted RBP11.01□□□□□ -0.65
NR1I3-220ENST00000505005 DNAH12Q6ZR08 3092 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 WDR81Q562E7 1941 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 LOXHD1Q8IVV2 1947 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 SLITRK3O94933 977 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 CD2BP2O95400 341 aaKnown RBP11□□□□□ -0.65
NR1I3-220ENST00000505005 ZSCAN20P17040 1043 aaPredicted RBP11□□□□□ -0.65
NR1I3-220ENST00000505005 SYT1P21579 422 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 ITGB8P26012 769 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 ABCD1P33897 745 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 TXLNAP40222 546 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 TECP42680 631 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 FOSBP53539 338 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 TFDP1Q14186 410 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 TARBP2Q15633 366 aaKnown RBP11□□□□□ -0.65
NR1I3-220ENST00000505005 XKR9Q5GH70 373 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 MARCH8Q5T0T0 291 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 DEFB128Q7Z7B8 93 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 SCLYQ96I15 445 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 CDK5RAP3Q96JB5 506 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 CHST12Q9NRB3 414 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 C1orf112Q9NSG2 853 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 DACT1Q9NYF0 836 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 KCND2Q9NZV8 630 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 CFAP45Q9UL16 551 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 DNM3Q9UQ16 869 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 AKT3Q9Y243 479 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 RWDD3Q9Y3V2 267 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 PCDHA11Q9Y5I1 949 aa11□□□□□ -0.65
NR1I3-220ENST00000505005 TANC1Q9C0D5 1861 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms