RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 ARL1P40616 181 aaPredicted RBP8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 ALDH5A1P51649 535 aaPredicted RBP8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 PMS1P54277 932 aaKnown RBP8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 IFI35P80217 286 aaPredicted RBP8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 TFAP4Q01664 338 aa8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 KLC1Q07866 573 aa8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 CAVIN4Q5BKX8 364 aa8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 C1orf54Q8WWF1 131 aa8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 XPO6Q96QU8 1125 aaKnown RBP8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 SH2D3AQ9BRG2 576 aa8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 MRPL46Q9H2W6 279 aaKnown RBP8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 VCX3BQ9H321 246 aa8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 TAF1DQ9H5J8 278 aaPredicted RBP8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 SRPRBQ9Y5M8 271 aaKnown RBP8.44□□□□□ -1.06
ATP2C1-208ENST00000504948 LTBP1Q14766 1721 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 LGALS16A8MUM7 142 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 SMIM22K7EJ46 135 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 STK4Q13043 487 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 PABPC4Q13310 644 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 RNF220Q5VTB9 566 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 ANKRD40Q6AI12 368 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 RBM43Q6ZSC3 357 aaKnown RBP8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 CCDC125Q86Z20 511 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 RAB3IPQ96QF0 476 aaPredicted RBP8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 RAB17Q9H0T7 212 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 E2F8A0AVK6 867 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 TPP2P29144 1249 aaPredicted RBP8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 ACAP1Q15027 740 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 MAP7D3Q8IWC1 876 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 LCORLQ8N3X6 602 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 TRIML1Q8N9V2 468 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 CCDC110Q8TBZ0 833 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 FERMT2Q96AC1 680 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 PLVAPQ9BX97 442 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 FIS1Q9Y3D6 152 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 NOC2LQ9Y3T9 749 aaKnown RBP8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 C2CD2Q9Y426 696 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 CTDP1Q9Y5B0 961 aaPredicted RBP8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 MYH14Q7Z406 1995 aaKnown RBP8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 ZNF233A6NK53 670 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 RASA4BC9J798 803 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 RASA4O43374 803 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 UBXN2AP68543 259 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 DPYDQ12882 1025 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 C2CD6Q53TS8 623 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 RBM26Q5T8P6 1007 aaKnown RBP8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 ZNF658Q5TYW1 1059 aaPredicted RBP8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 PHLDB3Q6NSJ2 640 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 TRAPPC11Q7Z392 1133 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 NPHS2Q9NP85 383 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 ETAA1Q9NY74 926 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 ZNF609O15014 1411 aa8.43□□□□□ -1.06
ATP2C1-208ENST00000504948 BMP15O95972 392 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 ESRRAP11474 423 aaPredicted RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 PDE6CP51160 858 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 SLC8A3P57103 927 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 USH1GQ495M9 461 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 ANKRD20A8PQ5CZ79 823 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 AKAP4Q5JQC9 854 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 RGS9BPQ6ZS82 235 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 MTMR8Q96EF0 704 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 ACSBG1Q96GR2 724 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 LRRC37BQ96QE4 947 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 KLHL11Q9NVR0 708 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 TUBE1Q9UJT0 475 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 SH2B2O14492 632 aaPredicted RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 MAP3K7O43318 606 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 NOL3O60936 208 aaKnown RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 NR2F2P24468 414 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 NKX1-1Q15270 411 aaPredicted RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 EML3Q32P44 896 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 ANKRD20A2Q5SQ80 823 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 SH2D4BQ5SQS7 431 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 ANKRD20A1Q5TYW2 823 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 HAUS3Q68CZ6 603 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 IL31Q6EBC2 164 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 PPM1KQ8N3J5 372 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 NT5C3AQ9H0P0 336 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 CUEDC2Q9H467 287 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 PCIF1Q9H4Z3 704 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 PIH1D3Q9NQM4 214 aaKnown RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 ZFATQ9P243 1243 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 FBXO2Q9UK22 296 aaPredicted RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 MAP1BP46821 2468 aaKnown RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 MEGF6O75095 1541 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 ATMINO43313 823 aaPredicted RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 TPD52L2O43399 206 aaKnown RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 STAT1P42224 750 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 ANTXR2P58335 489 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 C10orf76Q5T2E6 689 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 TMTC2Q8N394 836 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 PAF1Q8N7H5 531 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 NAF1Q96HR8 494 aaKnown RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 GREM2Q9H772 168 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 RMI1Q9H9A7 625 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 PPARGC1AQ9UBK2 798 aaKnown RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 ARMCX3Q9UH62 379 aaPredicted RBP8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 ENTPD5O75356 428 aa8.42□□□□□ -1.06
ATP2C1-208ENST00000504948 CBX6O95503 412 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms