RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 APOBEC3FQ8IUX4 373 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 TBC1D16Q8TBP0 767 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 AP1M1Q9BXS5 423 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 KRT1P04264 644 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 RPS6KC1Q96S38 1066 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 CNTNAP4Q9C0A0 1308 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 SEMA3FQ13275 785 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 SURF1Q15526 300 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 MTERF2Q49AM1 385 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 PRR5LQ6MZQ0 368 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 FAM193BQ96PV7 902 aaPredicted RBP17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 MCF2LO15068 1137 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 DNAJC24Q6P3W2 148 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 F5H6K3 240 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 LPXNO60711 386 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 NTSR2O95665 410 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 PRCPP42785 496 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 SLCO1A2P46721 670 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 KLRC3Q07444 240 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 SBK1Q52WX2 424 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 SPOUT1Q5T280 376 aaKnown RBP17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 TUBB6Q9BUF5 446 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 TBC1D22BQ9NU19 505 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 TXLNGQ9NUQ3 528 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 USP17L10C9JJH3 530 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 TBC1D10BQ4KMP7 808 aaPredicted RBP17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 ADGRG1Q9Y653 693 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 PODXLO00592 558 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 CTTNQ14247 550 aaKnown RBP17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 PDIA6Q15084 440 aa17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 GBP7Q8N8V2 638 aaPredicted RBP17.41■□□□□ 0.38
HMGXB3-202ENST00000503427 ITSN1Q15811 1721 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 TRIM49BA6NDI0 452 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 RWDD2BP57060 319 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 ASPHQ12797 758 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 SCYL3Q8IZE3 742 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 LINC00116Q8NCU8 138 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 GSDMBQ8TAX9 411 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 DCCP43146 1447 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 GOLGA8QA0A0J9YX86 632 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 LRRD1A4D1F6 860 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 GOLGA8OA6NCC3 632 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 GOLGA8NF8WBI6 632 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 FGGP02679 453 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 SNAP25P60880 206 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 KSR1Q8IVT5 923 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 GIMAP8Q8ND71 665 aaPredicted RBP17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 OXER1Q8TDS5 423 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 RMDN3Q96TC7 470 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 ZNF609O15014 1411 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 PALMO75781 387 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 WRNIP1Q96S55 665 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 MIF4GDA9UHW6 222 aaKnown RBP17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 MED7O43513 233 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 STRIP1Q5VSL9 837 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 SLFN12LQ6IEE8 588 aa17.4■□□□□ 0.38
HMGXB3-202ENST00000503427 CASP1P29466 404 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 SERPINB6P35237 376 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 PRELPP51888 382 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 ADCY1Q08828 1119 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 MTMR1Q13613 665 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 STOX1Q6ZVD7 989 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 POLR1AO95602 1720 aaPredicted RBP17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 MT-ND3P03897 115 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 NBPF3Q9H094 633 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 ZHX2Q9Y6X8 837 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 EXOC1LA0A1B0GW35 172 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 USP27XA6NNY8 438 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 FBXO41Q8TF61 875 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 PLAAQ9Y263 795 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 USP17L15C9J2P7 530 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 USP17L13C9JLJ4 530 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 USP17L11C9JVI0 530 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 USP17L18D6R9N7 530 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 USP17L22D6RA61 530 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 USP17L17D6RBQ6 530 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 USP17L19D6RCP7 530 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 USP17L20D6RJB6 530 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 CPP00450 1065 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 GSTA1P08263 222 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 GSTA2P09210 222 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 USP17L24Q0WX57 530 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 PRPSAP1Q14558 356 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 USP17L6PQ6QN14 398 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 PRPF38AQ8NAV1 312 aaKnown RBP17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 MCPH1Q8NEM0 835 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 CPVLQ9H3G5 476 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 NUB1Q9Y5A7 615 aa17.39■□□□□ 0.37
HMGXB3-202ENST00000503427 FAM196BA6NMK8 535 aa17.38■□□□□ 0.37
HMGXB3-202ENST00000503427 GOLGA8SH3BPF8 625 aa17.38■□□□□ 0.37
HMGXB3-202ENST00000503427 PRR29P0C7W0 189 aa17.38■□□□□ 0.37
HMGXB3-202ENST00000503427 KRT76Q01546 638 aa17.38■□□□□ 0.37
HMGXB3-202ENST00000503427 STXBP2Q15833 593 aa17.38■□□□□ 0.37
HMGXB3-202ENST00000503427 QRICH1Q2TAL8 776 aa17.38■□□□□ 0.37
HMGXB3-202ENST00000503427 FAM167AQ96KS9 214 aa17.38■□□□□ 0.37
HMGXB3-202ENST00000503427 CALR3Q96L12 384 aaKnown RBP17.38■□□□□ 0.37
HMGXB3-202ENST00000503427 LRRC53A6NM62 1247 aa17.38■□□□□ 0.37
HMGXB3-202ENST00000503427 WDR64B1ANS9 1081 aa17.38■□□□□ 0.37
HMGXB3-202ENST00000503427 PFDN6O15212 129 aa17.38■□□□□ 0.37
HMGXB3-202ENST00000503427 GPC4O75487 556 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms