RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 PLXNB2O15031 1838 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 KIAA1217Q5T5P2 1943 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 H0YCG3 227 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 LGR5O75473 907 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 ADCY5O95622 1261 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 SNAI1O95863 264 aaPredicted RBP9□□□□□ -0.97
TOPBP1-202ENST00000503338 GNRH1P01148 92 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 OATP04181 439 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 TPM2P07951 284 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 PRKCSHP14314 528 aaPredicted RBP9□□□□□ -0.97
TOPBP1-202ENST00000503338 CD44P16070 742 aaKnown RBP9□□□□□ -0.97
TOPBP1-202ENST00000503338 CDK11BP21127 795 aaKnown RBP9□□□□□ -0.97
TOPBP1-202ENST00000503338 CDC25BP30305 580 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 RFC5P40937 340 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 RTP1P59025 263 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 SP4Q02446 784 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 ACVR2BQ13705 512 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 DUSP28Q4G0W2 176 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 XKR9Q5GH70 373 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 CENPPQ6IPU0 288 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 TAPT1Q6NXT6 567 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 CCDC60Q8IWA6 550 aaPredicted RBP9□□□□□ -0.97
TOPBP1-202ENST00000503338 SMYD4Q8IYR2 804 aaPredicted RBP9□□□□□ -0.97
TOPBP1-202ENST00000503338 MYCT1Q8N699 235 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 KIAA0895Q8NCT3 520 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 NPLOC4Q8TAT6 608 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 BBXQ8WY36 941 aaPredicted RBP9□□□□□ -0.97
TOPBP1-202ENST00000503338 MRFAP1L1Q96HT8 127 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 CEP170P1Q96L14 293 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 GPR20Q99678 358 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 RUSC1Q9BVN2 902 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 NIFKQ9BYG3 293 aaKnown RBP9□□□□□ -0.97
TOPBP1-202ENST00000503338 RNF39Q9H2S5 420 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 ZHX3Q9H4I2 956 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 SMARCAD1Q9H4L7 1026 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 THAP9Q9H5L6 903 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 MRPL44Q9H9J2 332 aaKnown RBP9□□□□□ -0.97
TOPBP1-202ENST00000503338 SLC39A2Q9NP94 309 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 MAGEC2Q9UBF1 373 aaPredicted RBP9□□□□□ -0.97
TOPBP1-202ENST00000503338 Q9Y3F1 56 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 PCDHB13Q9Y5F0 798 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 PCDHA2Q9Y5H9 948 aa9□□□□□ -0.97
TOPBP1-202ENST00000503338 GSTTP1A0A1W2PQM5 241 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 ZNF862O60290 1169 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 USO1O60763 962 aaKnown RBP8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 HIP1RO75146 1068 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 ARIH2O95376 493 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 SERPINC1P01008 464 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 PLS3P13797 630 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 ZNF18P17022 549 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 TCF7P36402 384 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 SMTNP53814 917 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 LACTBP83111 547 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 FKBP3Q00688 224 aaKnown RBP8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 UGCGQ16739 394 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 BMT2Q1RMZ1 405 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 EDRF1Q3B7T1 1238 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 FILIP1LQ4L180 1135 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 HS1BP3Q53T59 392 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 BRDTQ58F21 947 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 MFSD14CQ5VZR4 134 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 ANO5Q75V66 913 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 SFR1Q86XK3 245 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 FAM178BQ8IXR5 827 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 GOLGA5Q8TBA6 731 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 SLC7A3Q8WY07 619 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 GLG1Q92896 1179 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 TRIM47Q96LD4 638 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 KATNBL1Q9H079 304 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 ST6GALNAC4Q9H4F1 302 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 ATP6V0A4Q9HBG4 840 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 CYP26B1Q9NR63 512 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 FANCLQ9NW38 375 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 CGNQ9P2M7 1197 aaKnown RBP8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 SEPT9Q9UHD8 586 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 GJD2Q9UKL4 321 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 ZNF215Q9UL58 517 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 LRRC37A2A6NM11 1700 aa8.99□□□□□ -0.97
TOPBP1-202ENST00000503338 NPHP3-ACAD11A0A0J9YXS1 232 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 CALUO43852 315 aaPredicted RBP8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 HBP1O60381 514 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 PPFIA4O75335 1185 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 STBD1O95210 358 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 GCNT3O95395 438 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 GNA14O95837 355 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 RPL13P26373 211 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 EEF1GP26641 437 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 PSMC4P43686 418 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 ZNF75DP51815 510 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 STX17P56962 302 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 UBASH3AP57075 661 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 SNRPFP62306 86 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 FANCCQ00597 558 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 SP3Q02447 781 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 RAD51AP2Q09MP3 1159 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 DMP1Q13316 513 aaPredicted RBP8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 HSP90AA2PQ14568 343 aaPredicted RBP8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 PPP2R5AQ15172 486 aa8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 KNOP1Q1ED39 458 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-202ENST00000503338 HSDL1Q3SXM5 330 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms