RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 ECE1P42892 770 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 EPHA7Q15375 998 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 LCE4AQ5TA78 99 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 AFAP1L2Q8N4X5 818 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 WDR48Q8TAF3 677 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 CALML6Q8TD86 181 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 ADAMTS17Q8TE56 1095 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 TTC1Q99614 292 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 BTBD2Q9BX70 525 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 IFT22Q9H7X7 185 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 LUC7LQ9NQ29 371 aaKnown RBP8.11□□□□□ -1.11
NIPBL-203ENST00000503274 FTSJ1Q9UET6 329 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 TGM5O43548 720 aa8.1□□□□□ -1.11
NIPBL-203ENST00000503274 ZEB2O60315 1214 aa8.1□□□□□ -1.11
NIPBL-203ENST00000503274 KCNC1P48547 511 aa8.1□□□□□ -1.11
NIPBL-203ENST00000503274 ADCY1Q08828 1119 aa8.1□□□□□ -1.11
NIPBL-203ENST00000503274 FAM26FQ5R3K3 315 aa8.1□□□□□ -1.11
NIPBL-203ENST00000503274 MCTP2Q6DN12 878 aa8.1□□□□□ -1.11
NIPBL-203ENST00000503274 LRSAM1Q6UWE0 723 aa8.1□□□□□ -1.11
NIPBL-203ENST00000503274 ZNF761Q86XN6 746 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-203ENST00000503274 SP8Q8IXZ3 490 aa8.1□□□□□ -1.11
NIPBL-203ENST00000503274 ZZZ3Q8IYH5 903 aa8.1□□□□□ -1.11
NIPBL-203ENST00000503274 FAM177A1Q8N128 213 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-203ENST00000503274 MARCH10Q8NA82 808 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-203ENST00000503274 EMC7Q9NPA0 242 aa8.1□□□□□ -1.11
NIPBL-203ENST00000503274 H0Y858 1186 aa8.09□□□□□ -1.11
NIPBL-203ENST00000503274 NEMP1O14524 444 aa8.09□□□□□ -1.11
NIPBL-203ENST00000503274 CYP1A1P04798 512 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-203ENST00000503274 BMP7P18075 431 aa8.09□□□□□ -1.11
NIPBL-203ENST00000503274 IL13RA1P78552 427 aa8.09□□□□□ -1.11
NIPBL-203ENST00000503274 SMAD3P84022 425 aaKnown RBP8.09□□□□□ -1.11
NIPBL-203ENST00000503274 NFKB2Q00653 900 aa8.09□□□□□ -1.11
NIPBL-203ENST00000503274 ALDH6A1Q02252 535 aaKnown RBP8.09□□□□□ -1.11
NIPBL-203ENST00000503274 FBLN7Q53RD9 439 aa8.09□□□□□ -1.11
NIPBL-203ENST00000503274 ESRP1Q6NXG1 681 aaKnown RBP8.09□□□□□ -1.11
NIPBL-203ENST00000503274 CXXC5Q7LFL8 322 aaKnown RBP8.09□□□□□ -1.11
NIPBL-203ENST00000503274 TXNDC5Q8NBS9 432 aaKnown RBP8.09□□□□□ -1.11
NIPBL-203ENST00000503274 YTHDC1Q96MU7 727 aaKnown RBP8.09□□□□□ -1.11
NIPBL-203ENST00000503274 FOXB1Q99853 325 aa8.09□□□□□ -1.11
NIPBL-203ENST00000503274 OR10A5Q9H207 317 aa8.09□□□□□ -1.11
NIPBL-203ENST00000503274 ZMAT4Q9H898 229 aa8.09□□□□□ -1.11
NIPBL-203ENST00000503274 UBA6A0AVT1 1052 aaPredicted RBP8.08□□□□□ -1.12
NIPBL-203ENST00000503274 CPEP16870 476 aa8.08□□□□□ -1.12
NIPBL-203ENST00000503274 CD40P25942 277 aa8.08□□□□□ -1.12
NIPBL-203ENST00000503274 LRRC32Q14392 662 aa8.08□□□□□ -1.12
NIPBL-203ENST00000503274 STILQ15468 1287 aa8.08□□□□□ -1.12
NIPBL-203ENST00000503274 RGL3Q3MIN7 710 aa8.08□□□□□ -1.12
NIPBL-203ENST00000503274 ATP13A4Q4VNC1 1196 aa8.08□□□□□ -1.12
NIPBL-203ENST00000503274 TTC38Q5R3I4 469 aa8.08□□□□□ -1.12
NIPBL-203ENST00000503274 GPR158Q5T848 1215 aa8.08□□□□□ -1.12
NIPBL-203ENST00000503274 MAML3Q96JK9 1138 aa8.08□□□□□ -1.12
NIPBL-203ENST00000503274 TMEM168Q9H0V1 697 aa8.08□□□□□ -1.12
NIPBL-203ENST00000503274 C9orf118A6NHY6 69 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 BRINP1O60477 761 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 SASH1O94885 1247 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 KLHL18O94889 574 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 PRLP01236 227 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 LSP1P33241 339 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 ID4P47928 161 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 SLC6A3Q01959 620 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 ROM1Q03395 351 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 WDR72Q3MJ13 1102 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 NUDT10Q8NFP7 164 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 RTF1Q92541 710 aaKnown RBP8.07□□□□□ -1.12
NIPBL-203ENST00000503274 NUDT11Q96G61 164 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 LCORQ96JN0 433 aaPredicted RBP8.07□□□□□ -1.12
NIPBL-203ENST00000503274 TUBGCP5Q96RT8 1024 aa8.07□□□□□ -1.12
NIPBL-203ENST00000503274 EYA4O95677 639 aa8.06□□□□□ -1.12
NIPBL-203ENST00000503274 APEX1P27695 318 aaKnown RBP8.06□□□□□ -1.12
NIPBL-203ENST00000503274 PHC1P78364 1004 aa8.06□□□□□ -1.12
NIPBL-203ENST00000503274 TERF2Q15554 542 aa8.06□□□□□ -1.12
NIPBL-203ENST00000503274 NT5DC1Q5TFE4 455 aa8.06□□□□□ -1.12
NIPBL-203ENST00000503274 KANK2Q63ZY3 851 aa8.06□□□□□ -1.12
NIPBL-203ENST00000503274 PHYKPLQ8IUZ5 450 aa8.06□□□□□ -1.12
NIPBL-203ENST00000503274 SYT8Q8NBV8 401 aa8.06□□□□□ -1.12
NIPBL-203ENST00000503274 KCNC2Q96PR1 638 aa8.06□□□□□ -1.12
NIPBL-203ENST00000503274 APOBEC2Q9Y235 224 aaKnown RBP8.06□□□□□ -1.12
NIPBL-203ENST00000503274 MROH6A6NGR9 719 aa8.05□□□□□ -1.12
NIPBL-203ENST00000503274 NOBOXO60393 691 aa8.05□□□□□ -1.12
NIPBL-203ENST00000503274 POU3F3P20264 500 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-203ENST00000503274 RGS3P49796 1198 aa8.05□□□□□ -1.12
NIPBL-203ENST00000503274 GJA9P57773 515 aa8.05□□□□□ -1.12
NIPBL-203ENST00000503274 CD83Q01151 205 aa8.05□□□□□ -1.12
NIPBL-203ENST00000503274 DDB1Q16531 1140 aa8.05□□□□□ -1.12
NIPBL-203ENST00000503274 SLFN12LQ6IEE8 588 aa8.05□□□□□ -1.12
NIPBL-203ENST00000503274 TIGD7Q6NT04 549 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-203ENST00000503274 C7orf31Q8N865 590 aa8.05□□□□□ -1.12
NIPBL-203ENST00000503274 ZNF610Q8N9Z0 462 aa8.05□□□□□ -1.12
NIPBL-203ENST00000503274 SLC5A5Q92911 643 aa8.05□□□□□ -1.12
NIPBL-203ENST00000503274 FAM126AQ9BYI3 521 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-203ENST00000503274 ZCCHC4Q9H5U6 513 aa8.05□□□□□ -1.12
NIPBL-203ENST00000503274 BARX1Q9HBU1 254 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-203ENST00000503274 FBXO10Q9UK96 956 aa8.05□□□□□ -1.12
NIPBL-203ENST00000503274 POLD1P28340 1107 aa8.04□□□□□ -1.12
NIPBL-203ENST00000503274 KIAA2012Q0VF49 1180 aa8.04□□□□□ -1.12
NIPBL-203ENST00000503274 NFATC3Q12968 1075 aa8.04□□□□□ -1.12
NIPBL-203ENST00000503274 STAT4Q14765 748 aa8.04□□□□□ -1.12
NIPBL-203ENST00000503274 BROXQ5VW32 411 aa8.04□□□□□ -1.12
NIPBL-203ENST00000503274 PRAMEF9Q5VWM5 478 aa8.04□□□□□ -1.12
NIPBL-203ENST00000503274 Q6ZUG5 572 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms