RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 IGKV6D-21A0A0A0MT36 114 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 KLF18A0A0U1RQI7 1052 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 DDX39AO00148 427 aaKnown RBP13.68□□□□□ -0.22
CNOT4-211ENST00000498534 RPS6KA5O75582 802 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 CSPG5O95196 566 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 ZP2Q05996 745 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 FUT2Q10981 343 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 ADAM15Q13444 863 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 SMAD2Q15796 467 aaKnown RBP13.68□□□□□ -0.22
CNOT4-211ENST00000498534 CLUL1Q15846 466 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 PAN2Q504Q3 1202 aaKnown RBP13.68□□□□□ -0.22
CNOT4-211ENST00000498534 ZNF484Q5JVG2 852 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 SWSAP1Q6NVH7 229 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 PDXDC2PQ6P474 469 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 ABHD15Q6UXT9 468 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 CKAP2LQ8IYA6 745 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 CRIPAKQ8N1N5 446 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 SPPL3Q8TCT6 385 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 ATP8B4Q8TF62 1192 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 LINC01599Q8WXQ3 324 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 TCEANC2Q96MN5 208 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 ZNF302Q9NR11 478 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 AAASQ9NRG9 546 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 TBC1D22BQ9NU19 505 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 TMEM260Q9NX78 707 aa13.68□□□□□ -0.22
CNOT4-211ENST00000498534 DENND3A2RUS2 1198 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 IPO5O00410 1097 aaKnown RBP13.67□□□□□ -0.22
CNOT4-211ENST00000498534 GPR182O15218 404 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 CCNE2O96020 404 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 ITGB1P05556 798 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 IBSPP21815 317 aaPredicted RBP13.67□□□□□ -0.22
CNOT4-211ENST00000498534 SARSP49591 514 aaKnown RBP13.67□□□□□ -0.22
CNOT4-211ENST00000498534 CLK2P49760 499 aaKnown RBP13.67□□□□□ -0.22
CNOT4-211ENST00000498534 NDUFV1P49821 464 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 RCAN1P53805 252 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 DLX2Q07687 328 aaPredicted RBP13.67□□□□□ -0.22
CNOT4-211ENST00000498534 TMEM266Q2M3C6 531 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 SPOUT1Q5T280 376 aaKnown RBP13.67□□□□□ -0.22
CNOT4-211ENST00000498534 JAKMIP3Q5VZ66 844 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 KIAA0319LQ8IZA0 1049 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 KLHL23Q8NBE8 558 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 MICAL1Q8TDZ2 1067 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 CCDC12Q8WUD4 166 aaPredicted RBP13.67□□□□□ -0.22
CNOT4-211ENST00000498534 MS4A3Q96HJ5 214 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 C6orf50Q9HD87 102 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 C1orf112Q9NSG2 853 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 TCEAL9Q9UHQ7 104 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 CD207Q9UJ71 328 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 PCDHB12Q9Y5F1 795 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 COL1A2P08123 1366 aa13.67□□□□□ -0.22
CNOT4-211ENST00000498534 FAM86B1E9PN63 330 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 MBTPS2O43462 519 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 PPFIA3O75145 1194 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 CYP3A4P08684 503 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 FAM86B2P0C5J1 330 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 CDC27P30260 824 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 ADD1P35611 737 aaKnown RBP13.66□□□□□ -0.22
CNOT4-211ENST00000498534 SMAD4Q13485 552 aaKnown RBP13.66□□□□□ -0.22
CNOT4-211ENST00000498534 CAMK1Q14012 370 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 PFKFB3Q16875 520 aaPredicted RBP13.66□□□□□ -0.22
CNOT4-211ENST00000498534 SLC24A5Q71RS6 500 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
CNOT4-211ENST00000498534 POF1BQ8WVV4 589 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 ADAM2Q99965 735 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 ZNF577Q9BSK1 485 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 TMX1Q9H3N1 280 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 FAM217BQ9NTX9 383 aaPredicted RBP13.66□□□□□ -0.22
CNOT4-211ENST00000498534 ST3GAL5Q9UNP4 418 aa13.66□□□□□ -0.22
CNOT4-211ENST00000498534 NOC2LQ9Y3T9 749 aaKnown RBP13.66□□□□□ -0.22
CNOT4-211ENST00000498534 LOXHD1Q8IVV2 1947 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 LINC01565O15544 149 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 DHX15O43143 795 aaKnown RBP13.65□□□□□ -0.22
CNOT4-211ENST00000498534 PSAPP07602 524 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 DNAJB1P25685 340 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 GNA11P29992 359 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 GTF2F1P35269 517 aaKnown RBP eCLIP13.65□□□□□ -0.22
CNOT4-211ENST00000498534 IRS1P35568 1242 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 METAP2P50579 478 aaKnown RBP eCLIP13.65□□□□□ -0.22
CNOT4-211ENST00000498534 CRYBB1P53674 252 aaPredicted RBP13.65□□□□□ -0.22
CNOT4-211ENST00000498534 AKAP17AQ02040 695 aaKnown RBP13.65□□□□□ -0.22
CNOT4-211ENST00000498534 UBE3AQ05086 875 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 ADCK5Q3MIX3 580 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 ZNF746Q6NUN9 644 aaPredicted RBP13.65□□□□□ -0.22
CNOT4-211ENST00000498534 RBM23Q86U06 439 aaKnown RBP13.65□□□□□ -0.22
CNOT4-211ENST00000498534 CCDC60Q8IWA6 550 aaPredicted RBP13.65□□□□□ -0.22
CNOT4-211ENST00000498534 METTL13Q8N6R0 699 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 EFHBQ8N7U6 833 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 BBXQ8WY36 941 aaPredicted RBP13.65□□□□□ -0.22
CNOT4-211ENST00000498534 ZMYND12Q9H0C1 365 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 TLE6Q9H808 572 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 CDHR5Q9HBB8 845 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 ERVK-5Q9HDB9 667 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 RGS18Q9NS28 235 aa13.65□□□□□ -0.22
CNOT4-211ENST00000498534 MUC6Q6W4X9 2439 aa13.64□□□□□ -0.23
CNOT4-211ENST00000498534 ESYT2A0FGR8 921 aa13.64□□□□□ -0.23
CNOT4-211ENST00000498534 MAGEB2O15479 319 aa13.64□□□□□ -0.23
CNOT4-211ENST00000498534 TBX10O75333 385 aa13.64□□□□□ -0.23
CNOT4-211ENST00000498534 CDC45O75419 566 aa13.64□□□□□ -0.23
CNOT4-211ENST00000498534 NRIP1P48552 1158 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms