RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 NAV1Q8NEY1 1877 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 DOCK3Q8IZD9 2030 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 LOC285556D6RIA3 1793 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 PNMA6EA0A0J9YXQ4 647 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 TRAF5O00463 557 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 BRINP1O60477 761 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 RFPL1O75677 317 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 WISP1O95388 367 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 NOS3P29474 1203 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 MAP2K2P36507 400 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 ECE1P42892 770 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 GYG1P46976 350 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 IREB2P48200 963 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 ATP8B2P98198 1209 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 PICALMQ13492 652 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 MTMR1Q13613 665 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 MVPQ14764 893 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 POU4F3Q15319 338 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 ATP2B3Q16720 1220 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 DEFB115Q30KQ5 88 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 CAVIN4Q5BKX8 364 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 MFSD14BQ5SR56 506 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 ANGEL2Q5VTE6 544 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 CXorf57Q6NSI4 855 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 GPAT2Q6NUI2 795 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 Q6ZS46 218 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 TTC6Q86TZ1 520 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 MYRIPQ8NFW9 859 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 ZDHHC15Q96MV8 337 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 CORO1BQ9BR76 489 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 USP26Q9BXU7 913 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 PUS7LQ9H0K6 701 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 RNF208Q9H0X6 261 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 ZHX3Q9H4I2 956 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 ZBTB40Q9NUA8 1239 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 MAP3K20Q9NYL2 800 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 RCAN3Q9UKA8 241 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 LZTS1Q9Y250 596 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 KIAA0100Q14667 2235 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 GAKO14976 1311 aa6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 ASTN2O75129 1339 aaPredicted RBP6.98□□□□□ -1.29
TMEM39A-212ENST00000497993 LOC100289279A0A1B0GTE1 492 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 FAM155AB1AL88 458 aaPredicted RBP6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 AGRPO00253 132 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 SRGAP3O43295 1099 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 CELF2O95319 508 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 NPTXRO95502 500 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 F2P00734 622 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 COL6A1P12109 1028 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 GUCY2CP25092 1073 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 CCNFP41002 786 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 TRAPPC10P48553 1259 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 ZNF157P51786 506 aaPredicted RBP6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 NBPF9Q3BBW0 867 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 EXOSC6Q5RKV6 272 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 HHIPL2Q6UWX4 724 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 SPICE1Q8N0Z3 855 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 UBASH3BQ8TF42 649 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 CDCA5Q96FF9 252 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 CDC6Q99741 560 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 MXD3Q9BW11 206 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 CEP41Q9BYV8 373 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 PPCSQ9HAB8 311 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 GBA2Q9HCG7 927 aaPredicted RBP6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 TAGLN3Q9UI15 199 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 DDX19BQ9UMR2 479 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 PA2G4Q9UQ80 394 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 MRPS23Q9Y3D9 190 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 PCDHB14Q9Y5E9 798 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 BAZ2AQ9UIF9 1905 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 WDR33Q9C0J8 1336 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 PARP14Q460N5 1801 aa6.97□□□□□ -1.29
TMEM39A-212ENST00000497993 ADM5C9JUS6 153 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 CA12O43570 354 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 ALX3O95076 343 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 ATE1O95260 518 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 PROCP04070 461 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 NME2P22392 152 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 MAOBP27338 520 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 MAP2K1Q02750 393 aaPredicted RBP6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 STRN3Q13033 797 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 NOGQ13253 232 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 TNFAIP1Q13829 316 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 SLC10A6Q3KNW5 377 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 CFAP100Q494V2 611 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 ANKRD34AQ69YU3 496 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 CEP85Q6P2H3 762 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 VHLLQ6RSH7 139 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 FAM83AQ86UY5 434 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 SPATS2Q86XZ4 545 aaKnown RBP6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 SIRT2Q8IXJ6 389 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 FTSJ3Q8IY81 847 aaKnown RBP6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 ZGPATQ8N5A5 531 aaKnown RBP6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 TEX19Q8NA77 164 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 LEO1Q8WVC0 666 aaPredicted RBP6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 FRAT1Q92837 279 aaPredicted RBP6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 CAPNS2Q96L46 248 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 YIPF4Q9BSR8 244 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 PAGR1Q9BTK6 254 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms