RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 MAGEB2O15479 319 aa17.27■□□□□ 0.36
NUP50-219ENST00000497960 MARCH6O60337 910 aa17.27■□□□□ 0.36
NUP50-219ENST00000497960 JAK2O60674 1132 aa17.27■□□□□ 0.36
NUP50-219ENST00000497960 ARHGEF15O94989 841 aa17.27■□□□□ 0.36
NUP50-219ENST00000497960 OATP04181 439 aa17.27■□□□□ 0.36
NUP50-219ENST00000497960 PPP4R3AQ6IN85 833 aa17.27■□□□□ 0.36
NUP50-219ENST00000497960 METTL13Q8N6R0 699 aa17.27■□□□□ 0.36
NUP50-219ENST00000497960 ETNPPLQ8TBG4 499 aa17.27■□□□□ 0.36
NUP50-219ENST00000497960 TOP1MTQ969P6 601 aa17.27■□□□□ 0.36
NUP50-219ENST00000497960 FAM20AQ96MK3 541 aa17.27■□□□□ 0.36
NUP50-219ENST00000497960 YME1L1Q96TA2 773 aa17.27■□□□□ 0.36
NUP50-219ENST00000497960 KDM3AQ9Y4C1 1321 aa17.26■□□□□ 0.35
NUP50-219ENST00000497960 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.26■□□□□ 0.35
NUP50-219ENST00000497960 ZBTB42B2RXF5 422 aa17.26■□□□□ 0.35
NUP50-219ENST00000497960 GTPBP6O43824 516 aaPredicted RBP17.26■□□□□ 0.35
NUP50-219ENST00000497960 SLC37A4O43826 429 aa17.26■□□□□ 0.35
NUP50-219ENST00000497960 CCNT1O60563 726 aaKnown RBP17.26■□□□□ 0.35
NUP50-219ENST00000497960 UPP2O95045 317 aa17.26■□□□□ 0.35
NUP50-219ENST00000497960 C22orf31O95567 290 aa17.26■□□□□ 0.35
NUP50-219ENST00000497960 CD52P31358 61 aa17.26■□□□□ 0.35
NUP50-219ENST00000497960 PRKCEQ02156 737 aa17.26■□□□□ 0.35
NUP50-219ENST00000497960 KIAA0319LQ8IZA0 1049 aa17.26■□□□□ 0.35
NUP50-219ENST00000497960 PPM1EQ8WY54 764 aa17.26■□□□□ 0.35
NUP50-219ENST00000497960 SNX21Q969T3 373 aa17.26■□□□□ 0.35
NUP50-219ENST00000497960 TGS1Q96RS0 853 aaKnown RBP17.26■□□□□ 0.35
NUP50-219ENST00000497960 LLPHQ9BRT6 129 aaKnown RBP17.26■□□□□ 0.35
NUP50-219ENST00000497960 GINS2Q9Y248 185 aa17.26■□□□□ 0.35
NUP50-219ENST00000497960 LINC01553A4QN01 128 aa17.25■□□□□ 0.35
NUP50-219ENST00000497960 RFXAPO00287 272 aa17.25■□□□□ 0.35
NUP50-219ENST00000497960 ZNF862O60290 1169 aa17.25■□□□□ 0.35
NUP50-219ENST00000497960 MMP1P03956 469 aa17.25■□□□□ 0.35
NUP50-219ENST00000497960 TMOD1P28289 359 aa17.25■□□□□ 0.35
NUP50-219ENST00000497960 FOSBP53539 338 aa17.25■□□□□ 0.35
NUP50-219ENST00000497960 HMGN5P82970 282 aaKnown RBP17.25■□□□□ 0.35
NUP50-219ENST00000497960 HTRA4P83105 476 aaPredicted RBP17.25■□□□□ 0.35
NUP50-219ENST00000497960 PAK2Q13177 524 aa17.25■□□□□ 0.35
NUP50-219ENST00000497960 NR5A1Q13285 461 aa17.25■□□□□ 0.35
NUP50-219ENST00000497960 FTHL17Q9BXU8 183 aa17.25■□□□□ 0.35
NUP50-219ENST00000497960 AGO3Q9H9G7 860 aaKnown RBP17.25■□□□□ 0.35
NUP50-219ENST00000497960 CDH23Q9H251 3354 aa17.25■□□□□ 0.35
NUP50-219ENST00000497960 PTPRSQ13332 1948 aa17.25■□□□□ 0.35
NUP50-219ENST00000497960 EPOPA6NHQ4 379 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 ENPP3O14638 875 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 TBX3O15119 743 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 BAG4O95429 457 aaKnown RBP17.24■□□□□ 0.35
NUP50-219ENST00000497960 ERVK-21P61565 698 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 SAFBQ15424 915 aaKnown RBP eCLIP17.24■□□□□ 0.35
NUP50-219ENST00000497960 UGCGQ16739 394 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 ODR4Q5SWX8 454 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 KRT40Q6A162 431 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 B3GNT9Q6UX72 402 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 DIS3L2Q8IYB7 885 aaKnown RBP17.24■□□□□ 0.35
NUP50-219ENST00000497960 MICALL1Q8N3F8 863 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 FAM184AQ8NB25 1140 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 MAP7D2Q96T17 732 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 KCNMB3Q9NPA1 279 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 PADI3Q9ULW8 664 aa17.24■□□□□ 0.35
NUP50-219ENST00000497960 PRRC2BQ5JSZ5 2229 aaKnown RBP17.24■□□□□ 0.35
NUP50-219ENST00000497960 EVPLQ92817 2033 aa17.23■□□□□ 0.35
NUP50-219ENST00000497960 BTBD18B2RXH4 712 aa17.23■□□□□ 0.35
NUP50-219ENST00000497960 PSMC5P62195 406 aa17.23■□□□□ 0.35
NUP50-219ENST00000497960 NFX1Q12986 1120 aaKnown RBP17.23■□□□□ 0.35
NUP50-219ENST00000497960 PPP2R5CQ13362 524 aa17.23■□□□□ 0.35
NUP50-219ENST00000497960 CCDC85BQ15834 202 aaPredicted RBP17.23■□□□□ 0.35
NUP50-219ENST00000497960 XKR3Q5GH77 459 aa17.23■□□□□ 0.35
NUP50-219ENST00000497960 EARS2Q5JPH6 523 aaKnown RBP17.23■□□□□ 0.35
NUP50-219ENST00000497960 EFCAB12Q6NXP0 572 aa17.23■□□□□ 0.35
NUP50-219ENST00000497960 FAM43BQ6ZT52 329 aaPredicted RBP17.23■□□□□ 0.35
NUP50-219ENST00000497960 ZNF710Q8N1W2 664 aa17.23■□□□□ 0.35
NUP50-219ENST00000497960 SP7Q8TDD2 431 aaPredicted RBP17.23■□□□□ 0.35
NUP50-219ENST00000497960 TNFRSF25Q93038 417 aa17.23■□□□□ 0.35
NUP50-219ENST00000497960 SEPT9Q9UHD8 586 aaPredicted RBP17.23■□□□□ 0.35
NUP50-219ENST00000497960 MTUS1Q9ULD2 1270 aa17.23■□□□□ 0.35
NUP50-219ENST00000497960 AKT3Q9Y243 479 aa17.23■□□□□ 0.35
NUP50-219ENST00000497960 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.23■□□□□ 0.35
NUP50-219ENST00000497960 FAM205CA6NFA0 338 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 DKC1O60832 514 aaKnown RBP eCLIP17.22■□□□□ 0.35
NUP50-219ENST00000497960 RPS6KA5O75582 802 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 POU3F3P20264 500 aaPredicted RBP17.22■□□□□ 0.35
NUP50-219ENST00000497960 CLCN3P51790 818 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 CRYBB1P53674 252 aaPredicted RBP17.22■□□□□ 0.35
NUP50-219ENST00000497960 TBC1D8BQ0IIM8 1120 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 GRB10Q13322 594 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 SPRED2Q7Z698 418 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 SLFN12Q8IYM2 578 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 C8orf76Q96K31 380 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 PPP1R16BQ96T49 567 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 NIFKQ9BYG3 293 aaKnown RBP17.22■□□□□ 0.35
NUP50-219ENST00000497960 TSPYL2Q9H2G4 693 aaPredicted RBP17.22■□□□□ 0.35
NUP50-219ENST00000497960 SUGCTQ9HAC7 445 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 VAV3Q9UKW4 847 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 SMC3Q9UQE7 1217 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 KIF3AQ9Y496 699 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
NUP50-219ENST00000497960 DDX11L8A8MPP1 907 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 EML1O00423 815 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 GPR182O15218 404 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 VTNP04004 478 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 HSP90AA1P07900 732 aaKnown RBP17.21■□□□□ 0.35
NUP50-219ENST00000497960 CUL4AQ13619 759 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms